RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ISM2Q6H9L7 571 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 CMTR1Q8N1G2 835 aaKnown RBP12.24□□□□□ -0.45
CCDC172-201ENST00000333254 DAGLBQ8NCG7 672 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 CYP2D7A0A087X1C5 515 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 ZPR1O75312 459 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCDC172-201ENST00000333254 CUL4BQ13620 913 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 NR1I3Q14994 352 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 E2F4Q16254 413 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 CDKAL1Q5VV42 579 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 CCDC82Q8N4S0 544 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 SRBD1Q8N5C6 995 aaKnown RBP12.23□□□□□ -0.45
CCDC172-201ENST00000333254 ZNF397Q8NF99 534 aaPredicted RBP12.23□□□□□ -0.45
CCDC172-201ENST00000333254 CTAGE1Q96RT6 745 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 TRMT1Q9NXH9 659 aaKnown RBP12.23□□□□□ -0.45
CCDC172-201ENST00000333254 LTBP1Q14766 1721 aa12.23□□□□□ -0.45
CCDC172-201ENST00000333254 GRM4Q14833 912 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 SPECC1Q5M775 1068 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 C12orf60Q5U649 245 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 ZNF215Q9UL58 517 aaPredicted RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 QSER1Q2KHR3 1735 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 ITIH6Q6UXX5 1313 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 SYNRGQ9UMZ2 1314 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 SMIM22K7EJ46 135 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 LDHCP07864 332 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 KLRK1P26718 216 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 PRDX5P30044 214 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 LONP1P36776 959 aaKnown RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 PBX1P40424 430 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 EARS2Q5JPH6 523 aaKnown RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 APTXQ7Z2E3 356 aaKnown RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 REXO1L1PQ8IX06 675 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 FNBP4Q8N3X1 1017 aaPredicted RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 IQUBQ8NA54 791 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 ZNF592Q92610 1267 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 PANX2Q96RD6 677 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 MED15Q96RN5 788 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
CCDC172-201ENST00000333254 NAA15Q9BXJ9 866 aaKnown RBP12.22□□□□□ -0.45
CCDC172-201ENST00000333254 C10orf71Q711Q0 1435 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 MYH8P13535 1937 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 XDHP47989 1333 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 A0A087X0B3 334 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 WTIPA6NIX2 430 aaPredicted RBP12.21□□□□□ -0.45
CCDC172-201ENST00000333254 TSPY2A6NKD2 308 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 TMEM232C9JQI7 657 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 LAD1O00515 517 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.45
CCDC172-201ENST00000333254 PRDM1O75626 825 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 MYL1P05976 194 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 CDK11BP21127 795 aaKnown RBP12.21□□□□□ -0.45
CCDC172-201ENST00000333254 FECHP22830 423 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 SPAG1Q07617 926 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 PTGDRQ13258 359 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 GRAPQ13588 217 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
CCDC172-201ENST00000333254 DZIP1Q86YF9 867 aaKnown RBP12.21□□□□□ -0.45
CCDC172-201ENST00000333254 AMOTL1Q8IY63 956 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 TC2NQ8N9U0 490 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 CCDC148Q8NFR7 591 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.45
CCDC172-201ENST00000333254 DHX58Q96C10 678 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 CCDC51Q96ER9 411 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 RMND1Q9NWS8 449 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 OGFRQ9NZT2 677 aa12.21□□□□□ -0.45
CCDC172-201ENST00000333254 BAZ2BQ9UIF8 2168 aaKnown RBP12.2□□□□□ -0.46
CCDC172-201ENST00000333254 M0R2N6 131 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 GNPATO15228 680 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 TOM1O60784 492 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 BAG3O95817 575 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 SMARCA1P28370 1054 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 NLRP5P59047 1200 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 ORC2Q13416 577 aaPredicted RBP12.2□□□□□ -0.46
CCDC172-201ENST00000333254 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 PDILTQ8N807 584 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 BAG1Q99933 345 aaPredicted RBP12.2□□□□□ -0.46
CCDC172-201ENST00000333254 KAT14Q9H8E8 782 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 ZNF287Q9HBT7 754 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 DNAI1Q9UI46 699 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 PCDHA4Q9UN74 947 aa12.2□□□□□ -0.46
CCDC172-201ENST00000333254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC172-201ENST00000333254 LRRC10BA6NIK2 292 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 PPP1R3GB7ZBB8 358 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 LDHBP07195 334 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 PRPHP41219 470 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 SYT10Q6XYQ8 523 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 ZNF804AQ7Z570 1209 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 BLIDQ8IZY5 108 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 C4orf32Q8N8J7 132 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms