RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 DHX37Q8IY37 1157 aaKnown RBP27.31■■□□□ 1.96
SOX1-201ENST00000330949 N4BP2L2Q92802 583 aaPredicted RBP27.31■■□□□ 1.96
SOX1-201ENST00000330949 ANGEL1Q9UNK9 670 aaKnown RBP27.31■■□□□ 1.96
SOX1-201ENST00000330949 REXO2Q9Y3B8 237 aaKnown RBP27.31■■□□□ 1.96
SOX1-201ENST00000330949 FGAP02671 866 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 ALS2CLQ60I27 953 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 OSBP2Q969R2 916 aa27.31■■□□□ 1.96
SOX1-201ENST00000330949 CABP4P57796 275 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 GRIN1Q05586 938 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 CCDC122Q5T0U0 273 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 PHKBQ93100 1093 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 SEC31BQ9NQW1 1179 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 SPEF2Q9C093 1822 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 CCT6AP40227 531 aaKnown RBP27.3■■□□□ 1.96
SOX1-201ENST00000330949 IARSP41252 1262 aaKnown RBP27.3■■□□□ 1.96
SOX1-201ENST00000330949 LRCH2Q5VUJ6 765 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 ZBTB3Q9H5J0 574 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 ODF2LQ9ULJ1 636 aa27.3■■□□□ 1.96
SOX1-201ENST00000330949 CD44P16070 742 aaKnown RBP27.29■■□□□ 1.96
SOX1-201ENST00000330949 PDCLQ13371 301 aa27.29■■□□□ 1.96
SOX1-201ENST00000330949 WLSQ5T9L3 541 aa27.29■■□□□ 1.96
SOX1-201ENST00000330949 IFNL2Q8IZJ0 200 aa27.29■■□□□ 1.96
SOX1-201ENST00000330949 VCPKMTQ9H867 229 aa27.29■■□□□ 1.96
SOX1-201ENST00000330949 IFIT1P09914 478 aaKnown RBP27.29■■□□□ 1.96
SOX1-201ENST00000330949 LRP10Q7Z4F1 713 aa27.29■■□□□ 1.96
SOX1-201ENST00000330949 LIMA1Q9UHB6 759 aaKnown RBP27.29■■□□□ 1.96
SOX1-201ENST00000330949 ANO9A1A5B4 782 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 LRRC10BA6NIK2 292 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 GCFC2P16383 781 aaKnown RBP27.28■■□□□ 1.96
SOX1-201ENST00000330949 SPAG1Q07617 926 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 SLIT3O75094 1523 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 ZNF213O14771 459 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 CALRP27797 417 aaKnown RBP27.28■■□□□ 1.96
SOX1-201ENST00000330949 KRT31Q15323 416 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 HSP90AB3PQ58FF7 597 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 RILPL1Q5EBL4 403 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 ZNF662Q6ZS27 426 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 TTLL7Q6ZT98 887 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 GPR108Q9NPR9 543 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 MEGF6O75095 1541 aa27.28■■□□□ 1.96
SOX1-201ENST00000330949 KRT86O43790 486 aa27.27■■□□□ 1.96
SOX1-201ENST00000330949 CDR1P51861 262 aa27.27■■□□□ 1.96
SOX1-201ENST00000330949 CCDC40Q4G0X9 1142 aa27.27■■□□□ 1.96
SOX1-201ENST00000330949 CHP1Q99653 195 aa27.27■■□□□ 1.96
SOX1-201ENST00000330949 RNF225M0QZC1 329 aaPredicted RBP27.27■■□□□ 1.96
SOX1-201ENST00000330949 HSF2BPO75031 334 aa27.27■■□□□ 1.96
SOX1-201ENST00000330949 NAP1L1P55209 391 aaKnown RBP27.27■■□□□ 1.96
SOX1-201ENST00000330949 SAFBQ15424 915 aaKnown RBP eCLIP27.27■■□□□ 1.96
SOX1-201ENST00000330949 CEP85LQ5SZL2 805 aa27.27■■□□□ 1.96
SOX1-201ENST00000330949 SRPRBQ9Y5M8 271 aaKnown RBP27.27■■□□□ 1.96
SOX1-201ENST00000330949 MST1RQ04912 1400 aa27.27■■□□□ 1.96
SOX1-201ENST00000330949 ECM29Q5VYK3 1845 aa27.26■■□□□ 1.96
SOX1-201ENST00000330949 FOXP2O15409 715 aa27.26■■□□□ 1.96
SOX1-201ENST00000330949 ERCC3P19447 782 aa27.26■■□□□ 1.96
SOX1-201ENST00000330949 CDC25AP30304 524 aa27.26■■□□□ 1.96
SOX1-201ENST00000330949 ACTN3Q08043 901 aaPredicted RBP27.26■■□□□ 1.96
SOX1-201ENST00000330949 IQCA1Q86XH1 822 aa27.26■■□□□ 1.96
SOX1-201ENST00000330949 TBC1D22AQ8WUA7 517 aa27.26■■□□□ 1.96
SOX1-201ENST00000330949 KRT83P78385 493 aa27.26■■□□□ 1.95
SOX1-201ENST00000330949 TTMPQ5BVD1 217 aa27.26■■□□□ 1.95
SOX1-201ENST00000330949 GSDMAQ96QA5 445 aa27.26■■□□□ 1.95
SOX1-201ENST00000330949 EPN3Q9H201 632 aa27.26■■□□□ 1.95
SOX1-201ENST00000330949 MYO5AQ9Y4I1 1855 aaKnown RBP27.26■■□□□ 1.95
SOX1-201ENST00000330949 MRPL12P52815 198 aaKnown RBP27.26■■□□□ 1.95
SOX1-201ENST00000330949 EPHB4P54760 987 aa27.26■■□□□ 1.95
SOX1-201ENST00000330949 EMBQ6PCB8 327 aa27.26■■□□□ 1.95
SOX1-201ENST00000330949 GGA2Q9UJY4 613 aa27.26■■□□□ 1.95
SOX1-201ENST00000330949 RASSF9O75901 435 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 A1BGP04217 495 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 TOB1P50616 345 aaPredicted RBP27.25■■□□□ 1.95
SOX1-201ENST00000330949 PPP2R5AQ15172 486 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 LRRC24Q50LG9 513 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 APOA5Q6Q788 366 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 MMGT1Q8N4V1 131 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 RRP36Q96EU6 259 aaKnown RBP27.25■■□□□ 1.95
SOX1-201ENST00000330949 CEP131Q9UPN4 1083 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 C1orf167Q5SNV9 1468 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 DRP2Q13474 957 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 WASHC4Q2M389 1173 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 NAA35Q5VZE5 725 aa27.25■■□□□ 1.95
SOX1-201ENST00000330949 UBN2Q6ZU65 1347 aa27.24■■□□□ 1.95
SOX1-201ENST00000330949 PPP1R3GB7ZBB8 358 aa27.24■■□□□ 1.95
SOX1-201ENST00000330949 C2orf54Q08AI8 447 aa27.24■■□□□ 1.95
SOX1-201ENST00000330949 TEX11Q8IYF3 940 aa27.24■■□□□ 1.95
SOX1-201ENST00000330949 OR8K1Q8NGG5 319 aa27.24■■□□□ 1.95
SOX1-201ENST00000330949 ARL8AQ96BM9 186 aa27.24■■□□□ 1.95
SOX1-201ENST00000330949 ZFYP08048 801 aaPredicted RBP27.24■■□□□ 1.95
SOX1-201ENST00000330949 COPB1P53618 953 aaKnown RBP27.24■■□□□ 1.95
SOX1-201ENST00000330949 VPS16Q9H269 839 aa27.24■■□□□ 1.95
SOX1-201ENST00000330949 PDE2AO00408 941 aaPredicted RBP27.23■■□□□ 1.95
SOX1-201ENST00000330949 RXRAP19793 462 aa27.23■■□□□ 1.95
SOX1-201ENST00000330949 LSP1P33241 339 aa27.23■■□□□ 1.95
SOX1-201ENST00000330949 FKBP4Q02790 459 aaKnown RBP eCLIP27.23■■□□□ 1.95
SOX1-201ENST00000330949 CRYMQ14894 314 aa27.23■■□□□ 1.95
SOX1-201ENST00000330949 TSR1Q2NL82 804 aaKnown RBP27.23■■□□□ 1.95
SOX1-201ENST00000330949 RNF187Q5TA31 235 aaPredicted RBP27.23■■□□□ 1.95
SOX1-201ENST00000330949 KIAA1328Q86T90 577 aa27.23■■□□□ 1.95
SOX1-201ENST00000330949 WASF1Q92558 559 aa27.23■■□□□ 1.95
SOX1-201ENST00000330949 AIDAQ96BJ3 306 aa27.23■■□□□ 1.95
SOX1-201ENST00000330949 C5P01031 1676 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms