RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 NAP1L1P55209 391 aaKnown RBP8.02□□□□□ -1.13
BEST3-202ENST00000330891 FILIP1LQ4L180 1135 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 RILPL1Q5EBL4 403 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 TTC38Q5R3I4 469 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 SMAP1Q8IYB5 467 aaPredicted RBP8.02□□□□□ -1.13
BEST3-202ENST00000330891 LINC00116Q8NCU8 138 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 PAGE5Q96GU1 130 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 SUGCTQ9HAC7 445 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
BEST3-202ENST00000330891 ENC1O14682 589 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 PHACTR2O75167 634 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 IPO7O95373 1038 aaKnown RBP8.02□□□□□ -1.13
BEST3-202ENST00000330891 ENOX2Q16206 610 aaKnown RBP8.02□□□□□ -1.13
BEST3-202ENST00000330891 INF2Q27J81 1249 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 ZNF569Q5MCW4 686 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 REXO1L1PQ8IX06 675 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 STAG1Q8WVM7 1258 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 ERO1AQ96HE7 468 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 NUP88Q99567 741 aaPredicted RBP8.02□□□□□ -1.13
BEST3-202ENST00000330891 SLF1Q9BQI6 1058 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 UBA5Q9GZZ9 404 aa8.02□□□□□ -1.13
BEST3-202ENST00000330891 ZNF219Q9P2Y4 722 aaPredicted RBP8.02□□□□□ -1.13
BEST3-202ENST00000330891 CCDC196A0A1B0GTZ2 297 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 ACTN4O43707 911 aaKnown RBP8.01□□□□□ -1.13
BEST3-202ENST00000330891 MDM2Q00987 491 aaPredicted RBP8.01□□□□□ -1.13
BEST3-202ENST00000330891 KIF4BQ2VIQ3 1234 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 SPECC1LQ69YQ0 1117 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 TC2NQ8N9U0 490 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 ZNF397Q8NF99 534 aaPredicted RBP8.01□□□□□ -1.13
BEST3-202ENST00000330891 WASF1Q92558 559 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 RNF41Q9H4P4 317 aaPredicted RBP8.01□□□□□ -1.13
BEST3-202ENST00000330891 POLD4Q9HCU8 107 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 PCNTO95613 3336 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 ZMYND10O75800 440 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 FXR1P51114 621 aaKnown RBP eCLIP8.01□□□□□ -1.13
BEST3-202ENST00000330891 FAM193AP78312 1265 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 DMTNQ08495 405 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 PICALMQ13492 652 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 MCM6Q14566 821 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 NFIXQ14938 502 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 TRIM65Q6PJ69 517 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 RAD9BQ6WBX8 426 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 GOLGA6L1Q8N7Z2 621 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 DRC1Q96MC2 740 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 PSMB7Q99436 277 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 OGFRQ9NZT2 677 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 DDX41Q9UJV9 622 aaKnown RBP8.01□□□□□ -1.13
BEST3-202ENST00000330891 FBXO3Q9UK99 471 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 UBR2Q8IWV8 1755 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 ABCC12Q96J65 1359 aa8.01□□□□□ -1.13
BEST3-202ENST00000330891 HIBADHP31937 336 aaKnown RBP8□□□□□ -1.13
BEST3-202ENST00000330891 RPS8P62241 208 aaKnown RBP8□□□□□ -1.13
BEST3-202ENST00000330891 NGLY1Q96IV0 654 aa8□□□□□ -1.13
BEST3-202ENST00000330891 RIOK1Q9BRS2 568 aaKnown RBP8□□□□□ -1.13
BEST3-202ENST00000330891 IMPACTQ9P2X3 320 aa8□□□□□ -1.13
BEST3-202ENST00000330891 FAM205AQ6ZU69 1335 aa8□□□□□ -1.13
BEST3-202ENST00000330891 ROBO1Q9Y6N7 1651 aa8□□□□□ -1.13
BEST3-202ENST00000330891 ERVV-1B6SEH8 477 aa8□□□□□ -1.13
BEST3-202ENST00000330891 RIMBP2O15034 1052 aa8□□□□□ -1.13
BEST3-202ENST00000330891 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
BEST3-202ENST00000330891 RAD51AP2Q09MP3 1159 aa8□□□□□ -1.13
BEST3-202ENST00000330891 SEC23AQ15436 765 aa8□□□□□ -1.13
BEST3-202ENST00000330891 IL17AQ16552 155 aa8□□□□□ -1.13
BEST3-202ENST00000330891 TYW1BQ6NUM6 668 aa8□□□□□ -1.13
BEST3-202ENST00000330891 CAGE1Q8TC20 777 aa8□□□□□ -1.13
BEST3-202ENST00000330891 CAPZA3Q96KX2 299 aa8□□□□□ -1.13
BEST3-202ENST00000330891 SETDB2Q96T68 719 aa8□□□□□ -1.13
BEST3-202ENST00000330891 DCP1AQ9NPI6 582 aaPredicted RBP8□□□□□ -1.13
BEST3-202ENST00000330891 GUCA1BQ9UMX6 200 aa8□□□□□ -1.13
BEST3-202ENST00000330891 SRPRBQ9Y5M8 271 aaKnown RBP8□□□□□ -1.13
BEST3-202ENST00000330891 BCL9O00512 1426 aa8□□□□□ -1.13
BEST3-202ENST00000330891 SYNRGQ9UMZ2 1314 aa8□□□□□ -1.13
BEST3-202ENST00000330891 IKBKBO14920 756 aa8□□□□□ -1.13
BEST3-202ENST00000330891 KLK7P49862 253 aa8□□□□□ -1.13
BEST3-202ENST00000330891 PLCD1P51178 756 aa8□□□□□ -1.13
BEST3-202ENST00000330891 TROAPQ12815 778 aa8□□□□□ -1.13
BEST3-202ENST00000330891 LETM2Q2VYF4 491 aa8□□□□□ -1.13
BEST3-202ENST00000330891 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
BEST3-202ENST00000330891 SH3RF3Q8TEJ3 882 aaPredicted RBP8□□□□□ -1.13
BEST3-202ENST00000330891 CHP1Q99653 195 aa8□□□□□ -1.13
BEST3-202ENST00000330891 LRP6O75581 1613 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 ZSCAN12O43309 604 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 ZPR1O75312 459 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 JAKMIP3Q5VZ66 844 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 KRT222Q8N1A0 295 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 NLRP3Q96P20 1036 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 TRIM34Q9BYJ4 488 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 TMEM60Q9H2L4 133 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 FOXP1Q9H334 677 aaPredicted RBP7.99□□□□□ -1.13
BEST3-202ENST00000330891 KAT14Q9H8E8 782 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 KANSL2Q9H9L4 492 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
BEST3-202ENST00000330891 FRMPD2Q68DX3 1309 aaPredicted RBP7.99□□□□□ -1.13
BEST3-202ENST00000330891 TAF1P21675 1872 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 AKR1B15C9JRZ8 316 aaPredicted RBP7.99□□□□□ -1.13
BEST3-202ENST00000330891 CCP110O43303 1012 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 SRGAP2O75044 1071 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 CLSTN1O94985 981 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 UBXN1Q04323 297 aa7.99□□□□□ -1.13
BEST3-202ENST00000330891 PPP2R3AQ06190 1150 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms