RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DHX58Q96C10 678 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 DYNLL2Q96FJ2 89 aa16.63■□□□□ 0.25
TPM3-206ENST00000330188 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 NT5C2P49902 561 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 NLRP5P59047 1200 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 GSTO1P78417 241 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 ATP2C1P98194 919 aaPredicted RBP16.62■□□□□ 0.25
TPM3-206ENST00000330188 DIXDC1Q155Q3 683 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 C15orf52Q6ZUT6 534 aaKnown RBP16.62■□□□□ 0.25
TPM3-206ENST00000330188 ZNF804AQ7Z570 1209 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 SH3RF1Q7Z6J0 888 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 DGKHQ86XP1 1220 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 GPR101Q96P66 508 aaPredicted RBP16.62■□□□□ 0.25
TPM3-206ENST00000330188 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 INTS13Q9NVM9 706 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 UBR3Q6ZT12 1888 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
TPM3-206ENST00000330188 ADAMTS3O15072 1205 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 SLFN14P0C7P3 912 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 ZNF18P17022 549 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 KIF5BP33176 963 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 PPP4CP60510 307 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 PRR5LQ6MZQ0 368 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 CCDC112Q8NEF3 446 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 ANKS1AQ92625 1134 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 LRRC4BQ9NT99 713 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 PSDA5PKW4 1024 aaPredicted RBP16.61■□□□□ 0.25
TPM3-206ENST00000330188 PTGDRQ13258 359 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 ANKRD7Q92527 254 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 MED15Q96RN5 788 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 NFE2L3Q9Y4A8 694 aa16.61■□□□□ 0.25
TPM3-206ENST00000330188 NRDCO43847 1150 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 BAG3O95817 575 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 TRAPPC10P48553 1259 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 GPSM2P81274 684 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 TRMT44Q8IYL2 757 aaKnown RBP16.6■□□□□ 0.25
TPM3-206ENST00000330188 PNMA1Q8ND90 353 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 PAGE5Q96GU1 130 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 GJD4Q96KN9 370 aaPredicted RBP16.6■□□□□ 0.25
TPM3-206ENST00000330188 PLCD1P51178 756 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 CERKQ8TCT0 537 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 PPP1R13BQ96KQ4 1090 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 MKNK2Q9HBH9 465 aa16.6■□□□□ 0.25
TPM3-206ENST00000330188 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
TPM3-206ENST00000330188 VWA3AA6NCI4 1184 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
TPM3-206ENST00000330188 AFMP43652 599 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 GRM4Q14833 912 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 SYCP1Q15431 976 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 HSP90AA4PQ58FG1 418 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 STAG2Q8N3U4 1231 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 RPGRQ92834 1020 aaKnown RBP16.59■□□□□ 0.25
TPM3-206ENST00000330188 RTFDC1Q9BY42 306 aaPredicted RBP16.59■□□□□ 0.25
TPM3-206ENST00000330188 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
TPM3-206ENST00000330188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.25
TPM3-206ENST00000330188 USP17L3A6NCW0 530 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 USP17L4A6NCW7 530 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 KIF2AO00139 706 aaPredicted RBP16.58■□□□□ 0.25
TPM3-206ENST00000330188 LDHCP07864 332 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 ERCC5P28715 1186 aaPredicted RBP16.58■□□□□ 0.25
TPM3-206ENST00000330188 DPYDQ12882 1025 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 PTPN21Q16825 1174 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 CRY2Q49AN0 593 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 USP17L1Q7RTZ2 530 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 SH3GLB2Q9NR46 395 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 MAD2L2Q9UI95 211 aa16.58■□□□□ 0.25
TPM3-206ENST00000330188 CALML3P27482 149 aa16.58■□□□□ 0.24
TPM3-206ENST00000330188 CASP1P29466 404 aa16.58■□□□□ 0.24
TPM3-206ENST00000330188 NCBP1Q09161 790 aaKnown RBP16.58■□□□□ 0.24
TPM3-206ENST00000330188 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
TPM3-206ENST00000330188 BLIDQ8IZY5 108 aa16.58■□□□□ 0.24
TPM3-206ENST00000330188 SLC44A5Q8NCS7 719 aa16.58■□□□□ 0.24
TPM3-206ENST00000330188 CD209Q9NNX6 404 aa16.58■□□□□ 0.24
TPM3-206ENST00000330188 FAM205AQ6ZU69 1335 aa16.58■□□□□ 0.24
TPM3-206ENST00000330188 UFL1O94874 794 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 TSPY3P0CV98 308 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 TSPY8P0CW00 308 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 MCM7P33993 719 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
TPM3-206ENST00000330188 IL17AQ16552 155 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 CT47A1Q5JQC4 288 aaPredicted RBP16.57■□□□□ 0.24
TPM3-206ENST00000330188 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.241e-12■□□□□ 9.1
TPM3-206ENST00000330188 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
TPM3-206ENST00000330188 GYS1P13807 737 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 RASA1P20936 1047 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 CDK11BP21127 795 aaKnown RBP16.57■□□□□ 0.24
TPM3-206ENST00000330188 ATP2B4P23634 1241 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 GOLGA8FQ08AF8 430 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 GOLGA8DPQ0D2H9 430 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 CUL4BQ13620 913 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 E2F4Q16254 413 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 KIF18AQ8NI77 898 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms