RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 HLFQ16534 295 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 SKIDA1Q1XH10 827 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 CCDC38Q502W7 563 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 HHATQ5VTY9 493 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 TSHZ1Q6ZSZ6 1077 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 ATG9AQ7Z3C6 839 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 FAM228AQ86W67 206 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 FUKQ8N0W3 1084 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 ZFAND2BQ8WV99 257 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 ACSBG1Q96GR2 724 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 PLEKHG4BQ96PX9 1271 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 ALS2CR12Q96Q35 445 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 ALDH8A1Q9H2A2 487 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 GOLPH3LQ9H4A5 285 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 EBF2Q9HAK2 575 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 CWC25Q9NXE8 425 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 RGL1Q9NZL6 768 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 RCOR1Q9UKL0 485 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 SAMM50Q9Y512 469 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 TNS2Q63HR2 1409 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 CTAGE9A4FU28 777 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 ERVV-2B6SEH9 535 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 OPA1O60313 960 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 ZNF202O95125 648 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 PDHBP11177 359 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 GGCXP38435 758 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 TBX2Q13207 712 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 CREB3L3Q68CJ9 461 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 BZW1Q7L1Q6 419 aaKnown RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 CCDC170Q8IYT3 715 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 CCHCR1Q8TD31 782 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 RUBCNQ92622 972 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 SPAG5Q96R06 1193 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 COPRSQ9NQ92 184 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 SNRKQ9NRH2 765 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 TPCN1Q9ULQ1 816 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 GOLGA6BA6NDN3 693 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 ENO4A6NNW6 628 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 PYGLP06737 847 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 USP14P54578 494 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 UBASH3AP57075 661 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 STK3Q13188 491 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 SNX1Q13596 522 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 NKX1-1Q15270 411 aaPredicted RBP8.4□□□□□ -1.06
TRIM49-201ENST00000329758 DPCR1Q3MIW9 517 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 RABL6Q3YEC7 729 aaPredicted RBP8.4□□□□□ -1.06
TRIM49-201ENST00000329758 CRELD2Q6UXH1 353 aaPredicted RBP8.4□□□□□ -1.06
TRIM49-201ENST00000329758 SMIM5Q71RC9 77 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 RASSF8Q8NHQ8 419 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 B4GALNT2Q8NHY0 566 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 P3H4Q92791 437 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 DTNBP1Q96EV8 351 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 LRRC2Q9BYS8 371 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 KIAA1468Q9P260 1216 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 MYO1AQ9UBC5 1043 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 BLOC1S6Q9UL45 172 aa8.4□□□□□ -1.06
TRIM49-201ENST00000329758 AGPSO00116 658 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 BIN1O00499 593 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 SLC27A2O14975 620 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 ZSCAN9O15535 394 aaPredicted RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 ADORA1P30542 326 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 NECTIN1Q15223 517 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 NAA35Q5VZE5 725 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 TOGARAM2Q6ZUX3 1019 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 RPGRIP1Q96KN7 1286 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 CCDC114Q96M63 670 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 SCLT1Q96NL6 688 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 NAPGQ99747 312 aaPredicted RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 NAA15Q9BXJ9 866 aaKnown RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 HOOK1Q9UJC3 728 aaKnown RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 NWD2Q9ULI1 1742 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 MGRN1O60291 552 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 PYGBP11216 843 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 PAPOLAP51003 745 aaKnown RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 KCNQ4P56696 695 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 XRCC4Q13426 336 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 KARSQ15046 597 aaKnown RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 CCDC181Q5TID7 509 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 ARHGAP22Q7Z5H3 698 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 FSIP1Q8NA03 581 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 FAM81AQ8TBF8 368 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 ZNF526Q8TF50 670 aaPredicted RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 NUP133Q8WUM0 1156 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 MRPS27Q92552 414 aaKnown RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 CCDC97Q96F63 343 aaPredicted RBP8.39□□□□□ -1.07
TRIM49-201ENST00000329758 EPN3Q9H201 632 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 ZBTB1Q9Y2K1 713 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 C15orf41Q9Y2V0 281 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 PCDHGC5Q9Y5F6 944 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 ZNF609O15014 1411 aa8.39□□□□□ -1.07
TRIM49-201ENST00000329758 A0A1W2PQ27 194 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 A0A1W2PQ64 194 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 A0A1W2PQD8 194 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms