RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 HAND2P61296 217 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 HERVK_113P62684 666 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 IMMTQ16891 758 aaKnown RBP17.57■□□□□ 0.4
CLRN1-203ENST00000328863 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 NEDD1Q8NHV4 660 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 PPP4R2Q9NY27 417 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 NYAP2Q9P242 653 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 SYNPO2Q9UMS6 1093 aa17.57■□□□□ 0.4
CLRN1-203ENST00000328863 IGKV6D-41A0A0C4DH26 115 aa17.56■□□□□ 0.4
CLRN1-203ENST00000328863 ZNF213O14771 459 aa17.56■□□□□ 0.4
CLRN1-203ENST00000328863 TTLL1O95922 423 aa17.56■□□□□ 0.4
CLRN1-203ENST00000328863 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
CLRN1-203ENST00000328863 CEP95Q96GE4 821 aa17.56■□□□□ 0.4
CLRN1-203ENST00000328863 ABHD8Q96I13 439 aa17.56■□□□□ 0.4
CLRN1-203ENST00000328863 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLRN1-203ENST00000328863 RLFQ13129 1914 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 RAD21O60216 631 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
CLRN1-203ENST00000328863 PRMT2P55345 433 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 TFAP4Q01664 338 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
CLRN1-203ENST00000328863 AKNAD1Q5T1N1 836 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 MFSD6Q6ZSS7 791 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 IL25Q9H293 177 aa17.55■□□□□ 0.4
CLRN1-203ENST00000328863 SGSM2O43147 1006 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 FMNL1O95466 1100 aaPredicted RBP17.54■□□□□ 0.4
CLRN1-203ENST00000328863 FGRP09769 529 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 HOXD10P28358 340 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 PSMC4P43686 418 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 FAM47AQ5JRC9 791 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 CATSPERGQ6ZRH7 1159 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 TBC1D10CQ8IV04 446 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 SPICE1Q8N0Z3 855 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 ARHGAP39Q9C0H5 1083 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 MORF4L1Q9UBU8 362 aa17.54■□□□□ 0.4
CLRN1-203ENST00000328863 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
CLRN1-203ENST00000328863 MYPNQ86TC9 1320 aa17.53■□□□□ 0.4
CLRN1-203ENST00000328863 TNPO2O14787 897 aaKnown RBP17.53■□□□□ 0.4
CLRN1-203ENST00000328863 LBX2Q6XYB7 198 aa17.53■□□□□ 0.4
CLRN1-203ENST00000328863 SIAH1Q8IUQ4 282 aa17.53■□□□□ 0.4
CLRN1-203ENST00000328863 LRRC47Q8N1G4 583 aaKnown RBP17.53■□□□□ 0.4
CLRN1-203ENST00000328863 ESR2Q92731 530 aa17.53■□□□□ 0.4
CLRN1-203ENST00000328863 P2RX7Q99572 595 aaKnown RBP17.53■□□□□ 0.4
CLRN1-203ENST00000328863 PAGR1Q9BTK6 254 aa17.53■□□□□ 0.4
CLRN1-203ENST00000328863 STX8Q9UNK0 236 aa17.53■□□□□ 0.4
CLRN1-203ENST00000328863 PTPN22Q9Y2R2 807 aa17.53■□□□□ 0.4
CLRN1-203ENST00000328863 HTTP42858 3142 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 NEDD4P46934 1319 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 PLXNB2O15031 1838 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 SPDYE16A6NNV3 312 aaPredicted RBP17.52■□□□□ 0.4
CLRN1-203ENST00000328863 FLOT1O75955 427 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
CLRN1-203ENST00000328863 ERVK-9P63128 1117 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 ERVK-24P63145 666 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 GMCL1P1Q8NEA9 526 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 GPRC5AQ8NFJ5 357 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 TRIM47Q96LD4 638 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 HPS5Q9UPZ3 1129 aa17.52■□□□□ 0.4
CLRN1-203ENST00000328863 U3KPZ7 1027 aaPredicted RBP17.52■□□□□ 0.4
CLRN1-203ENST00000328863 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
CLRN1-203ENST00000328863 CDC45O75419 566 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 NDUFB10O96000 172 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 CCNA1P78396 465 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
CLRN1-203ENST00000328863 MB21D1Q8N884 522 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 COA7Q96BR5 231 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 NBPF3Q9H094 633 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 CNNM2Q9H8M5 875 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
CLRN1-203ENST00000328863 SRRDQ9UH36 339 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 RABGAP1Q9Y3P9 1069 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
CLRN1-203ENST00000328863 CTGFP29279 349 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 CAP1Q01518 475 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 COG2Q14746 738 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 KIAA1755Q5JYT7 1200 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 FAM83BQ5T0W9 1011 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 MKL1Q969V6 931 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 ESYT1Q9BSJ8 1104 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 KRT23Q9C075 422 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 HOXC10Q9NYD6 342 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 PTCH2Q9Y6C5 1203 aa17.5■□□□□ 0.39
CLRN1-203ENST00000328863 F5H6K3 240 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 MAPK4P31152 587 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 KLRC3Q07444 240 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 SLC9C1Q4G0N8 1177 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 IQCA1Q86XH1 822 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 SOCS4Q8WXH5 440 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 TXNRD2Q9NNW7 524 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
CLRN1-203ENST00000328863 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
CLRN1-203ENST00000328863 DOCK3Q8IZD9 2030 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms