RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 SND1Q7KZF4 910 aaKnown RBP eCLIP17.06■□□□□ 0.32
PTPN21-201ENST00000328736 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 WDR46O15213 610 aaKnown RBP17.05■□□□□ 0.32
PTPN21-201ENST00000328736 CFBP00751 764 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 RNASE9P60153 205 aaKnown RBP17.05■□□□□ 0.32
PTPN21-201ENST00000328736 DLGAP5Q15398 846 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 SMCR8Q8TEV9 937 aaPredicted RBP17.05■□□□□ 0.32
PTPN21-201ENST00000328736 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
PTPN21-201ENST00000328736 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
PTPN21-201ENST00000328736 ERCC3P19447 782 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 NAA25Q14CX7 972 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 TTLL3Q9Y4R7 772 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 PZPP20742 1482 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
PTPN21-201ENST00000328736 TNNI1P19237 187 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 CHURC1Q8WUH1 139 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 PFDN6O15212 129 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 HOXB7P09629 217 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 RPS6KA1Q15418 735 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 BEND3Q5T5X7 828 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 ZNF790Q6PG37 636 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 VSIG1Q86XK7 387 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 CSADQ9Y600 493 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 MAN1A1P33908 653 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 MAGEA1P43355 309 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 CFAP221Q4G0U5 840 aa17.05■□□□□ 0.32
PTPN21-201ENST00000328736 hCG_1642624A0A1W2PR95 340 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 KRT15P19012 456 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 YARSP54577 528 aaKnown RBP17.04■□□□□ 0.32
PTPN21-201ENST00000328736 DYMQ7RTS9 669 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 H7C1D1 291 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 CCDC84Q86UT8 332 aaPredicted RBP17.04■□□□□ 0.32
PTPN21-201ENST00000328736 ZBTB8OSQ8IWT0 167 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 SPATA5Q8NB90 893 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 RSAD2Q8WXG1 361 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 TRIM31Q9BZY9 425 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 PPARDQ03181 441 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 TNFAIP1Q13829 316 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 PEX26Q7Z412 305 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 RAB17Q9H0T7 212 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
PTPN21-201ENST00000328736 NDUFAB1O14561 156 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 KRT81Q14533 505 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 PDZD4Q76G19 769 aaPredicted RBP17.04■□□□□ 0.32
PTPN21-201ENST00000328736 TBC1D7Q9P0N9 293 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 MYO1AQ9UBC5 1043 aa17.04■□□□□ 0.32
PTPN21-201ENST00000328736 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 H0YCG3 227 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 GLG1Q92896 1179 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 ARPP21Q9UBL0 812 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-201ENST00000328736 TRIM50Q86XT4 487 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 HAUS1Q96CS2 278 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 TBC1D8O95759 1140 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 POSTNQ15063 836 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 MIS12Q9H081 205 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 VPS37BQ9H9H4 285 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 PHBP35232 272 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPN21-201ENST00000328736 PRKG1Q13976 671 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 LONRF3Q496Y0 759 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPN21-201ENST00000328736 RAB20Q9NX57 234 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 GRK7Q8WTQ7 553 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 PHKBQ93100 1093 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 MLXIPQ9HAP2 919 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 ATP8A2Q9NTI2 1148 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 PNMA2Q9UL42 364 aa17.03■□□□□ 0.32
PTPN21-201ENST00000328736 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 TNNC2P02585 160 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 RPS6KA2Q15349 733 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 ARHGEF16Q5VV41 709 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 KLHL7Q8IXQ5 586 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 HVCN1Q96D96 273 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 GOLGA8CPA6NN73 597 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 GAS7O60861 476 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 DENND2CQ68D51 928 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 BUB1BO60566 1050 aaPredicted RBP17.02■□□□□ 0.32
PTPN21-201ENST00000328736 N4BP1O75113 896 aaKnown RBP17.02■□□□□ 0.32
PTPN21-201ENST00000328736 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.32
PTPN21-201ENST00000328736 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
PTPN21-201ENST00000328736 STAM2O75886 525 aa17.02■□□□□ 0.31
PTPN21-201ENST00000328736 TCP10Q12799 353 aa17.02■□□□□ 0.31
PTPN21-201ENST00000328736 HADHQ16836 314 aaKnown RBP17.02■□□□□ 0.31
PTPN21-201ENST00000328736 REXO1Q8N1G1 1221 aaKnown RBP17.02■□□□□ 0.31
PTPN21-201ENST00000328736 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.31
PTPN21-201ENST00000328736 FAM193BQ96PV7 902 aaPredicted RBP17.02■□□□□ 0.31
PTPN21-201ENST00000328736 TAB2Q9NYJ8 693 aa17.02■□□□□ 0.31
PTPN21-201ENST00000328736 MAP3K21Q5TCX8 1036 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 A0A1B0GUA9 196 aa17.01■□□□□ 0.31
PTPN21-201ENST00000328736 TPH2Q8IWU9 490 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms