RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 HDAC9Q9UKV0 1011 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 E2F4Q16254 413 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 Q6ZUG5 572 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 IFNL3Q8IZI9 196 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 PSMD1Q99460 953 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 NACAP1Q9BZK3 213 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 CFAP45Q9UL16 551 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 JRKLQ9Y4A0 524 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 ANKRD31Q8N7Z5 1873 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 GUCY2CP25092 1073 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 LMOD1P29536 600 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-201ENST00000326195 LMAN1P49257 510 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 TPM4P67936 248 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 CT47A1Q5JQC4 288 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-201ENST00000326195 NBPF11Q86T75 865 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 TMEM39BQ9GZU3 492 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 MKNK2Q9HBH9 465 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 ADAM21Q9UKJ8 722 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 CYP21A2P08686 494 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 NECTIN1Q15223 517 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 ZYXQ15942 572 aaKnown RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 RALYLQ86SE5 291 aaKnown RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 RREB1Q92766 1687 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 PLCD1P51178 756 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 TNIP1Q15025 636 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 CDC42EP5Q6NZY7 148 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 MYL10Q9BUA6 226 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 H3BQF6 201 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 KINO60870 393 aaKnown RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 DHX37Q8IY37 1157 aaKnown RBP11.8□□□□□ -0.52
ABCF1-201ENST00000326195 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 SDF4Q9BRK5 362 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 RRAGCQ9HB90 399 aa11.8□□□□□ -0.52
ABCF1-201ENST00000326195 GSG1L2A8MUP6 293 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 NMT2O60551 498 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 ME1P48163 572 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 UBE3CQ15386 1083 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
ABCF1-201ENST00000326195 ANGEL2Q5VTE6 544 aaKnown RBP11.79□□□□□ -0.52
ABCF1-201ENST00000326195 NKX2-3Q8TAU0 364 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 UBXN4Q92575 508 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 NCAPGQ9BPX3 1015 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 EPB41L4AQ9HCS5 686 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-201ENST00000326195 TRDNQ13061 729 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 MAP1SQ66K74 1059 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-201ENST00000326195 DHX40Q8IX18 779 aaKnown RBP11.79□□□□□ -0.52
ABCF1-201ENST00000326195 LEO1Q8WVC0 666 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-201ENST00000326195 NMRK2Q9NPI5 230 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 CENPFP49454 3210 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 TCRBV5S4A2TA0A5A2 114 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 GDF11O95390 407 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 GSTO1P78417 241 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 ARMCX5Q6P1M9 558 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 SARM1Q6SZW1 724 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 NFXL1Q6ZNB6 911 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 NUP133Q8WUM0 1156 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 CARD6Q9BX69 1037 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 HELLSQ9NRZ9 838 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 DDX19AQ9NUU7 478 aaKnown RBP11.79□□□□□ -0.52
ABCF1-201ENST00000326195 DNAI1Q9UI46 699 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 STX8Q9UNK0 236 aa11.79□□□□□ -0.52
ABCF1-201ENST00000326195 MYO1BO43795 1136 aa11.78□□□□□ -0.52
ABCF1-201ENST00000326195 MYOZ2Q9NPC6 264 aa11.78□□□□□ -0.52
ABCF1-201ENST00000326195 WNT10BO00744 389 aa11.78□□□□□ -0.52
ABCF1-201ENST00000326195 SEMA3EO15041 775 aa11.78□□□□□ -0.52
ABCF1-201ENST00000326195 JAK2O60674 1132 aa11.78□□□□□ -0.52
ABCF1-201ENST00000326195 HMGB1P09429 215 aaKnown RBP11.78□□□□□ -0.52
ABCF1-201ENST00000326195 CC2D1AQ6P1N0 951 aaPredicted RBP11.78□□□□□ -0.52
ABCF1-201ENST00000326195 GOLGA5Q8TBA6 731 aa11.78□□□□□ -0.52
ABCF1-201ENST00000326195 MYCBPQ99417 103 aaPredicted RBP11.78□□□□□ -0.52
ABCF1-201ENST00000326195 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
ABCF1-201ENST00000326195 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.52
ABCF1-201ENST00000326195 NEMFO60524 1076 aa11.77□□□□□ -0.52
ABCF1-201ENST00000326195 APOBEC3HQ6NTF7 200 aaKnown RBP11.77□□□□□ -0.52
ABCF1-201ENST00000326195 CMTR1Q8N1G2 835 aaKnown RBP11.77□□□□□ -0.52
ABCF1-201ENST00000326195 ZNF396Q96N95 335 aaPredicted RBP11.77□□□□□ -0.52
ABCF1-201ENST00000326195 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.52
ABCF1-201ENST00000326195 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.52
ABCF1-201ENST00000326195 ELP1O95163 1332 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 GRIN3BO60391 1043 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 TADA3O75528 432 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 TBC1D10CQ8IV04 446 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 AMOTL1Q8IY63 956 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 CSRNP1Q96S65 589 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 RIOK1Q9BRS2 568 aaKnown RBP11.77□□□□□ -0.53
ABCF1-201ENST00000326195 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
ABCF1-201ENST00000326195 IRS2Q9Y4H2 1338 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.53
ABCF1-201ENST00000326195 NRDCO43847 1150 aa11.77□□□□□ -0.53
ABCF1-201ENST00000326195 SYNE3Q6ZMZ3 975 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms