RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 CCDC152Q4G0S7 254 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 PNKPQ96T60 521 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 MYCBPQ99417 103 aaPredicted RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 CNNM2Q9H8M5 875 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 N4BP3O15049 544 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
NLRC3-201ENST00000324659 UQCRFS1P1P0C7P4 283 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 ACTN2P35609 894 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 LPIN2Q92539 896 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 SHISA4Q96DD7 197 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 EEF2KMTQ96G04 330 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 PAGE5Q96GU1 130 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 NUP88Q99567 741 aaPredicted RBP13.64□□□□□ -0.23
NLRC3-201ENST00000324659 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 TFCP2L1Q9NZI6 479 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 CEP131Q9UPN4 1083 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 AKAP11Q9UKA4 1901 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 TNKSO95271 1327 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 PLEKHA8P1O95397 391 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 FILIP1LQ4L180 1135 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 PACS2Q86VP3 889 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 MYO1BO43795 1136 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 DPYDQ12882 1025 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 RRAGBQ5VZM2 374 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 SLF1Q9BQI6 1058 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
NLRC3-201ENST00000324659 TRIM28Q13263 835 aaKnown RBP13.63□□□□□ -0.23
NLRC3-201ENST00000324659 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
NLRC3-201ENST00000324659 SPATA1Q5VX52 437 aa13.63□□□□□ -0.23
NLRC3-201ENST00000324659 TFR2Q9UP52 801 aa13.63□□□□□ -0.23
NLRC3-201ENST00000324659 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
NLRC3-201ENST00000324659 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
NLRC3-201ENST00000324659 ARID4AP29374 1257 aaPredicted RBP13.63□□□□□ -0.23
NLRC3-201ENST00000324659 GEMIN8Q9NWZ8 242 aaKnown RBP13.63□□□□□ -0.23
NLRC3-201ENST00000324659 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
NLRC3-201ENST00000324659 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 MFAP3LO75121 409 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 GYPCP04921 128 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 PPARAQ07869 468 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 KANK3Q6NY19 840 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ANKZF1Q9H8Y5 726 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 TRIM10Q9UDY6 481 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 CTAGE9A4FU28 777 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
NLRC3-201ENST00000324659 NCAPH2Q6IBW4 605 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 HINFPQ9BQA5 517 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ABCB6Q9NP58 842 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ADD3Q9UEY8 706 aaKnown RBP13.62□□□□□ -0.23
NLRC3-201ENST00000324659 CDC23Q9UJX2 597 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ADAMTSL3P82987 1691 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ENC1O14682 589 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 BRD2P25440 801 aaKnown RBP13.62□□□□□ -0.23
NLRC3-201ENST00000324659 MCM7P33993 719 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 KRT2P35908 639 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ADGRA1Q86SQ6 560 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
NLRC3-201ENST00000324659 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
NLRC3-201ENST00000324659 GUCA1BQ9UMX6 200 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 COL18A1P39060 1754 aa13.62□□□□□ -0.23
NLRC3-201ENST00000324659 EIF3CLB5ME19 914 aaKnown RBP13.61□□□□□ -0.23
NLRC3-201ENST00000324659 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
NLRC3-201ENST00000324659 IL6STP40189 918 aaPredicted RBP13.61□□□□□ -0.23
NLRC3-201ENST00000324659 ITPK1Q13572 414 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 NBPF5PQ86XG9 351 aaPredicted RBP13.61□□□□□ -0.23
NLRC3-201ENST00000324659 PANX2Q96RD6 677 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 PLIN2Q99541 437 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 EIF3CQ99613 913 aaKnown RBP13.61□□□□□ -0.23
NLRC3-201ENST00000324659 GNPATO15228 680 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 ZPR1O75312 459 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 XBP1P17861 261 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 EVX2Q03828 476 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 PTGDRQ13258 359 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 MICALL1Q8N3F8 863 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 RASSF8Q8NHQ8 419 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 VSNL1P62760 191 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 ERVK-24P63145 666 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 CHRNDQ07001 517 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 KRT31Q15323 416 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 HSP90B2PQ58FF3 399 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 NCAPGQ9BPX3 1015 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 ZNF652Q9Y2D9 606 aa13.61□□□□□ -0.23
NLRC3-201ENST00000324659 GUCY2CP25092 1073 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 CUL4BQ13620 913 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 ALX1Q15699 326 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms