RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ZNF445P59923 1031 aa8.71□□□□□ -1.01
CIITA-201ENST00000324288 TUBB2AQ13885 445 aa8.71□□□□□ -1.01
CIITA-201ENST00000324288 POMGNT1Q8WZA1 660 aa8.71□□□□□ -1.01
CIITA-201ENST00000324288 TUBB2BQ9BVA1 445 aa8.71□□□□□ -1.01
CIITA-201ENST00000324288 FAM207AQ9NSI2 230 aaPredicted RBP8.71□□□□□ -1.01
CIITA-201ENST00000324288 SPDYE16A6NNV3 312 aaPredicted RBP8.71□□□□□ -1.01
CIITA-201ENST00000324288 TAF11Q15544 211 aa8.71□□□□□ -1.01
CIITA-201ENST00000324288 SPDYE2Q495Y8 402 aa8.71□□□□□ -1.01
CIITA-201ENST00000324288 C2CD5Q86YS7 1000 aa8.71□□□□□ -1.01
CIITA-201ENST00000324288 ZNF594Q96JF6 807 aaPredicted RBP8.71□□□□□ -1.01
CIITA-201ENST00000324288 MRPL44Q9H9J2 332 aaKnown RBP8.71□□□□□ -1.01
CIITA-201ENST00000324288 CALUO43852 315 aaPredicted RBP8.71□□□□□ -1.02
CIITA-201ENST00000324288 GYS2P54840 703 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 LRRC23Q53EV4 343 aaPredicted RBP8.71□□□□□ -1.02
CIITA-201ENST00000324288 U2AF1L4Q8WU68 220 aaKnown RBP8.71□□□□□ -1.02
CIITA-201ENST00000324288 BZW2Q9Y6E2 419 aaKnown RBP8.71□□□□□ -1.02
CIITA-201ENST00000324288 KSR2Q6VAB6 950 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 SKA2Q8WVK7 121 aaPredicted RBP8.71□□□□□ -1.02
CIITA-201ENST00000324288 NLRC4Q9NPP4 1024 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 ANKFY1Q9P2R3 1169 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 A0A087WWV3 80 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 GNPATO15228 680 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 GCNT3O95395 438 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 IFNB1P01574 187 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 ARHGAP44Q17R89 818 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 JDP2Q8WYK2 163 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.02
CIITA-201ENST00000324288 ZC3H12CQ9C0D7 883 aaKnown RBP8.71□□□□□ -1.02
CIITA-201ENST00000324288 WDR91A4D1P6 747 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 ARHGEF35A5YM69 484 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 GOLGA8KD6RF30 607 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 CASP2P42575 452 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 APOEP02649 317 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 CFAP221Q4G0U5 840 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 NUDCD3Q8IVD9 361 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 CPXCR1Q8N123 301 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 KLHL14Q9P2G3 628 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 MYCT1Q8N699 235 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 GDAP1Q8TB36 358 aa8.71□□□□□ -1.02
CIITA-201ENST00000324288 AATFQ9NY61 560 aaKnown RBP eCLIP8.71□□□□□ -1.02
CIITA-201ENST00000324288 GNAT2P19087 354 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 CHMLP26374 656 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 GNL1P36915 607 aaPredicted RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 LLGL1Q15334 1064 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 MED10Q9BTT4 135 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 V9GY48 417 aaPredicted RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 CCDC93Q567U6 631 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 METTL13Q8N6R0 699 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 DYDC2Q96IM9 177 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 FAN1Q9Y2M0 1017 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 RPS6KB1P23443 525 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 TRIM14Q14142 442 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 BCAS4Q8TDM0 211 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 CACYBPQ9HB71 228 aaKnown RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 ITKQ08881 620 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 VWA3BQ502W6 1294 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 CNNM4Q6P4Q7 775 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 IFT122Q9HBG6 1241 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 PPIP5K1Q6PFW1 1433 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 PLCG2P16885 1265 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 CEP85Q6P2H3 762 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 ANKRD65E5RJM6 399 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 CTNNA1P35221 906 aaKnown RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 SLC9C1Q4G0N8 1177 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 BRAPQ7Z569 592 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 PALM2Q8IXS6 379 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 PRPF31Q8WWY3 499 aaKnown RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 TMOD4Q9NZQ9 345 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 LUC7L3O95232 432 aaKnown RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 PNOCQ13519 176 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 ANKRD44Q8N8A2 993 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 GPHNQ9NQX3 736 aaPredicted RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 MYH9P35579 1960 aaKnown RBP8.7□□□□□ -1.02
CIITA-201ENST00000324288 TMTC1Q8IUR5 882 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 KRT81Q14533 505 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 KCNJ14Q9UNX9 436 aa8.7□□□□□ -1.02
CIITA-201ENST00000324288 POSTNQ15063 836 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 RP1L1Q8IWN7 2480 aaPredicted RBP8.69□□□□□ -1.02
CIITA-201ENST00000324288 SLC4A1P02730 911 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 CYP2J2P51589 502 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 TTC38Q5R3I4 469 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 TSPYL6Q8N831 410 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 PAK1Q13153 545 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 SLC27A2O14975 620 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 TROVE2P10155 538 aaKnown RBP eCLIP8.69□□□□□ -1.02
CIITA-201ENST00000324288 SESTD1Q86VW0 696 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 Q9H521 79 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 BUB1O43683 1085 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 RMDN2Q96LZ7 410 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 SART1O43290 800 aaKnown RBP8.69□□□□□ -1.02
CIITA-201ENST00000324288 PDHA1P08559 390 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 ZBTB17Q13105 803 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 MTMR3Q13615 1198 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 TMEM259Q4ZIN3 620 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 CCDC125Q86Z20 511 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 JRKLQ9Y4A0 524 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 SAR1BQ9Y6B6 198 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 ADGRL1O94910 1474 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms