RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 NBPF26B4DH59 902 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 PARP1P09874 1014 aaKnown RBP17.22■□□□□ 0.35
GCFC2-201ENST00000321027 TRIM14Q14142 442 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 NBPF14Q5TI25 921 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
GCFC2-201ENST00000321027 NBPF15Q8N660 670 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 EYA3Q99504 573 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 ZSWIM5Q9P217 1185 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 DMTNQ08495 405 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 FBXO38Q6PIJ6 1188 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 SYMPKQ92797 1274 aaKnown RBP17.22■□□□□ 0.35
GCFC2-201ENST00000321027 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
GCFC2-201ENST00000321027 EBAG9O00559 213 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 ADD2P35612 726 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 IFI16Q16666 785 aaKnown RBP17.21■□□□□ 0.35
GCFC2-201ENST00000321027 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
GCFC2-201ENST00000321027 IKBKBO14920 756 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 OPA1O60313 960 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 STX10O60499 249 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 ARID4AP29374 1257 aaPredicted RBP17.21■□□□□ 0.35
GCFC2-201ENST00000321027 PPP2R5BQ15173 497 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 RGS22Q8NE09 1264 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 GPCPD1Q9NPB8 672 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 FAM207AQ9NSI2 230 aaPredicted RBP17.21■□□□□ 0.35
GCFC2-201ENST00000321027 RAPGEF1Q13905 1077 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 STOX1Q6ZVD7 989 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 PLEKHA4Q9H4M7 779 aa17.21■□□□□ 0.35
GCFC2-201ENST00000321027 PPP6R2O75170 966 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
GCFC2-201ENST00000321027 MED23Q9ULK4 1368 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 CASP14P31944 242 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 SPATA1Q5VX52 437 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 PLA2G4DQ86XP0 818 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 TMEM131LA2VDJ0 1609 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 CDC25AP30304 524 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 RAD51AP2Q09MP3 1159 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 FAM76AQ8TAV0 307 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 BICD1Q96G01 975 aa17.2■□□□□ 0.34
GCFC2-201ENST00000321027 SUSD4Q5VX71 490 aa17.19■□□□□ 0.34
GCFC2-201ENST00000321027 GPKOWQ92917 476 aaPredicted RBP eCLIP17.19■□□□□ 0.34
GCFC2-201ENST00000321027 MORC3Q14149 939 aa17.19■□□□□ 0.34
GCFC2-201ENST00000321027 GPATCH11Q8N954 259 aa17.19■□□□□ 0.34
GCFC2-201ENST00000321027 MROH1Q8NDA8 1641 aa17.19■□□□□ 0.34
GCFC2-201ENST00000321027 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
GCFC2-201ENST00000321027 SH2B2O14492 632 aaPredicted RBP17.18■□□□□ 0.34
GCFC2-201ENST00000321027 MAGEA1P43355 309 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 SARM1Q6SZW1 724 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
GCFC2-201ENST00000321027 TRIML1Q8N9V2 468 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 PCDHB6Q9Y5E3 794 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 PPLO60437 1756 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 CFAP58Q5T655 872 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
GCFC2-201ENST00000321027 SECISBP2LQ93073 1101 aaKnown RBP17.18■□□□□ 0.34
GCFC2-201ENST00000321027 PIH1D3Q9NQM4 214 aaKnown RBP17.18■□□□□ 0.34
GCFC2-201ENST00000321027 TBC1D7Q9P0N9 293 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 HDAC9Q9UKV0 1011 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 DIP2AQ14689 1571 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 CD163L1Q9NR16 1453 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 INF2Q27J81 1249 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 DCAF17Q5H9S7 520 aaPredicted RBP17.18■□□□□ 0.34
GCFC2-201ENST00000321027 TBC1D5Q92609 795 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 LRWD1Q9UFC0 647 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 MAN1B1Q9UKM7 699 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 TLDC2A0PJX2 215 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 AFAP1L1Q8TED9 768 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 SELENOOQ9BVL4 669 aa17.18■□□□□ 0.34
GCFC2-201ENST00000321027 CCDC172P0C7W6 258 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 MCAMP43121 646 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 ZSCAN26Q16670 478 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 UTP14CQ5TAP6 766 aaKnown RBP17.17■□□□□ 0.34
GCFC2-201ENST00000321027 TYW1BQ6NUM6 668 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 RASSF4Q9H2L5 321 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 NLRC4Q9NPP4 1024 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
GCFC2-201ENST00000321027 KRT13P13646 458 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 CLCN6P51797 869 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 TUBB2AQ13885 445 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
GCFC2-201ENST00000321027 NONOQ15233 471 aaKnown RBP eCLIP17.17■□□□□ 0.34
GCFC2-201ENST00000321027 CNNM4Q6P4Q7 775 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 FAM196AQ6ZSG2 479 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 CCDC155Q8N6L0 562 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 TUBB2BQ9BVA1 445 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 SAR1BQ9Y6B6 198 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 FAM170AA1A519 330 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 ACTN2P35609 894 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 GTF2IP78347 998 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 CABP7Q86V35 215 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 PLVAPQ9BX97 442 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms