RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 FAM53CQ9NYF3 392 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 GLTPD2A6NH11 291 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
GINS3-201ENST00000318129 EPS15P42566 896 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 SEC23AQ15436 765 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 DGKHQ86XP1 1220 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 SLC12A7Q9Y666 1083 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 TNKSO95271 1327 aa11.75□□□□□ -0.53
GINS3-201ENST00000318129 SMTNL1A8MU46 457 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 DHX16O60231 1041 aaKnown RBP11.74□□□□□ -0.53
GINS3-201ENST00000318129 TBC1D12O60347 775 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 EGFRP00533 1210 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 SHMT1P34896 483 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 FAM193AP78312 1265 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 CCDC183Q5T5S1 534 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
GINS3-201ENST00000318129 ENAHQ8N8S7 591 aaPredicted RBP11.74□□□□□ -0.53
GINS3-201ENST00000318129 GTF3C6Q969F1 213 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
GINS3-201ENST00000318129 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 AP5Z1O43299 807 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 LARGE1O95461 756 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 RASA3Q14644 834 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 PPP2R5BQ15173 497 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 TRPM4Q8TD43 1214 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 HOOK2Q96ED9 719 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 LLPHQ9BRT6 129 aaKnown RBP11.74□□□□□ -0.53
GINS3-201ENST00000318129 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 PITPNM2Q9BZ72 1349 aa11.74□□□□□ -0.53
GINS3-201ENST00000318129 PLIN4Q96Q06 1357 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 GOLGA8BA8MQT2 603 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 ZBTB43O43298 467 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 IRX3P78415 501 aaPredicted RBP11.73□□□□□ -0.53
GINS3-201ENST00000318129 CERKLQ49MI3 558 aaPredicted RBP11.73□□□□□ -0.53
GINS3-201ENST00000318129 CATIPQ7Z7H3 387 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
GINS3-201ENST00000318129 PGAP2Q9UHJ9 254 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 MYH8P13535 1937 aa11.73□□□□□ -0.53
GINS3-201ENST00000318129 IQCA1LA6NCM1 817 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 CALM1P0DP23 149 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 CALM2P0DP24 149 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 CALM3P0DP25 149 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 MAP3K10Q02779 954 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 STK3Q13188 491 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
GINS3-201ENST00000318129 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 USP50Q70EL3 339 aaPredicted RBP11.72□□□□□ -0.53
GINS3-201ENST00000318129 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 IL17RBQ9NRM6 502 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 SIPA1L1O43166 1804 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
GINS3-201ENST00000318129 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
GINS3-201ENST00000318129 CREBRFQ8IUR6 639 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 DEFB129Q9H1M3 183 aa11.72□□□□□ -0.53
GINS3-201ENST00000318129 DDAH1O94760 285 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 AKR1B1P15121 316 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
GINS3-201ENST00000318129 SCRN1Q12765 414 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 CPLX2Q6PUV4 134 aaKnown RBP11.71□□□□□ -0.53
GINS3-201ENST00000318129 ZNF654Q8IZM8 581 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 ZC3H15Q8WU90 426 aaKnown RBP11.71□□□□□ -0.53
GINS3-201ENST00000318129 FUCA2Q9BTY2 467 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 DNAJC18Q9H819 358 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 KAT14Q9H8E8 782 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 SENP2Q9HC62 589 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
GINS3-201ENST00000318129 NID2Q14112 1375 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 IGKV6D-41A0A0C4DH26 115 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 GOLGA6L6A8MZA4 724 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 NMT2O60551 498 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.54
GINS3-201ENST00000318129 NOVP48745 357 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.54
GINS3-201ENST00000318129 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 DCPSQ96C86 337 aaKnown RBP11.71□□□□□ -0.54
GINS3-201ENST00000318129 CABP5Q9NP86 173 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 SCN4AP35499 1836 aa11.71□□□□□ -0.54
GINS3-201ENST00000318129 ASTN2O75129 1339 aaPredicted RBP11.7□□□□□ -0.54
GINS3-201ENST00000318129 ERICH4A6NGS2 130 aa11.7□□□□□ -0.54
GINS3-201ENST00000318129 MPHOSPH10O00566 681 aaKnown RBP11.7□□□□□ -0.54
GINS3-201ENST00000318129 CPLX1O14810 134 aa11.7□□□□□ -0.54
GINS3-201ENST00000318129 CDKL5O76039 1030 aa11.7□□□□□ -0.54
GINS3-201ENST00000318129 TOP1P11387 765 aaKnown RBP11.7□□□□□ -0.54
GINS3-201ENST00000318129 EPHX2P34913 555 aa11.7□□□□□ -0.54
GINS3-201ENST00000318129 ST3GAL1Q11201 340 aa11.7□□□□□ -0.54
GINS3-201ENST00000318129 ABCB5Q2M3G0 1257 aa11.7□□□□□ -0.54
GINS3-201ENST00000318129 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms