RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 BUB1O43683 1085 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 NEFHP12036 1026 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 ASIC1P78348 528 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 LRRC24Q50LG9 513 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 CEP85LQ5SZL2 805 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 TCERG1LQ5VWI1 586 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 TYW1BQ6NUM6 668 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 NOA1Q8NC60 698 aaKnown RBP8.44□□□□□ -1.06
CDHR3-201ENST00000317716 CABS1Q96KC9 395 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 TRIM10Q9UDY6 481 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 JAG2Q9Y219 1238 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 PRR29P0C7W0 189 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 RFC4P35249 363 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 GGCXP38435 758 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 SIK1P57059 783 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 EPHA10Q5JZY3 1008 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 TTLL7Q6ZT98 887 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 CWC25Q9NXE8 425 aaPredicted RBP8.44□□□□□ -1.06
CDHR3-201ENST00000317716 MAN1B1Q9UKM7 699 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 MEGF6O75095 1541 aa8.44□□□□□ -1.06
CDHR3-201ENST00000317716 CDK12Q9NYV4 1490 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 A0A087WUV0 522 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 CCDC194A0A1B0GVG4 234 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 MYCNP04198 464 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 ATP5JP18859 108 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 KRT83P78385 493 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 KIF23Q02241 960 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 GCKRQ14397 625 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 CCDC40Q4G0X9 1142 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 TMTC1Q8IUR5 882 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 MICAL1Q8TDZ2 1067 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 PNKPQ96T60 521 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 CCDC196A0A1B0GTZ2 297 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 KIF28PB7ZC32 967 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 PPFIA4O75335 1185 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 UBE4AQ14139 1066 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 POLA2Q14181 598 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 SLC39A14Q15043 492 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 MCTP2Q6DN12 878 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 MMS22LQ6ZRQ5 1243 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 FAM196AQ6ZSG2 479 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 EFCAB13Q8IY85 973 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 KIRREL3Q8IZU9 778 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 N4BP2L2Q92802 583 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 SECISBP2LQ93073 1101 aaKnown RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 PAIP2Q9BPZ3 127 aaKnown RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 PUS3Q9BZE2 481 aaKnown RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 ZBTB1Q9Y2K1 713 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 MRFAP1Q9Y605 127 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 V9GY48 417 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 A0A1W2PQ27 194 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 A0A1W2PQ64 194 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 A0A1W2PQD8 194 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 CCDC172P0C7W6 258 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 SH2D3CQ8N5H7 860 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 NLRC4Q9NPP4 1024 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 LUC7LQ9NQ29 371 aaKnown RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 DDX21Q9NR30 783 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 AKAP2Q9Y2D5 859 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 EPN1Q9Y6I3 576 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-201ENST00000317716 KNDC1Q76NI1 1749 aa8.43□□□□□ -1.06
CDHR3-201ENST00000317716 PIK3C2AO00443 1686 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 ESYT3A0FGR9 886 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 PPARAQ07869 468 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 PIK3AP1Q6ZUJ8 805 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 POTEDQ86YR6 584 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 EHBP1Q8NDI1 1231 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 NELFBQ8WX92 580 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 EPSTI1Q96J88 318 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 FUT8Q9BYC5 575 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 ARMT1Q9H993 441 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 ATF5Q9Y2D1 282 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 A0A0U1RQJ8 604 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 PSMA7O14818 248 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 ATP8B1O43520 1251 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 BUB1BO60566 1050 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 MBD4O95243 580 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 VIMP08670 466 aaKnown RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 ADORA1P30542 326 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 GCKP35557 465 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 IL15P40933 162 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 PDE4BQ07343 736 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 SPAG1Q07617 926 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 WHAMMP3Q1A5X7 153 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 B4GALNT4Q76KP1 1039 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 CCDC25Q86WR0 208 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 NAA15Q9BXJ9 866 aaKnown RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 COL5A2P05997 1499 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 M0R2C6 588 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 CLTAP09496 248 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 MAP3K12Q12852 859 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 ADAT2Q7Z6V5 191 aaKnown RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 CATIPQ7Z7H3 387 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
CDHR3-201ENST00000317716 FNBP4Q8N3X1 1017 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-201ENST00000317716 MAGEB6Q8N7X4 407 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms