RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 STX1AQ16623 288 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 APOBEC3HQ6NTF7 200 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 hCG_1642624A0A1W2PR95 340 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 VEGFAP15692 232 aaPredicted RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 KRI1Q8N9T8 703 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 MXD3Q9BW11 206 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 DNAJC25Q9H1X3 360 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 MYO3BQ8WXR4 1341 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 M0R2N6 131 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 ZNF165P49910 485 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 EN1Q05925 392 aaPredicted RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 C11orf57Q6ZUT1 292 aaPredicted RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 CLIC6Q96NY7 704 aa12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 TTF2Q9UNY4 1162 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 SRPRBQ9Y5M8 271 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-201ENST00000316738 GNAQP50148 359 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 STRIP1Q5VSL9 837 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 FAM177A1Q8N128 213 aaPredicted RBP12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 ZNF622Q969S3 477 aaKnown RBP eCLIP12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 CABP5Q9NP86 173 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 CYTH3O43739 400 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 DACT2Q5SW24 774 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 ZDHHC15Q96MV8 337 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 BPIFA3Q9BQP9 254 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 KCNQ5Q9NR82 932 aa12.64□□□□□ -0.39
EFCAB11-201ENST00000316738 FAM205CA6NFA0 338 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 SMARCA1P28370 1054 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 CDC42EP5Q6NZY7 148 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 TMX4Q9H1E5 349 aaPredicted RBP12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 ANO10Q9NW15 660 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 STK32BQ9NY57 414 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 CHRNA5P30532 468 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 SYKP43405 635 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 GRIN1Q05586 938 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 PLA2G4DQ86XP0 818 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 CEP131Q9UPN4 1083 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 ZKSCAN5Q9Y2L8 839 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 SDF4Q9BRK5 362 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 SPZ1Q9BXG8 430 aa12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
EFCAB11-201ENST00000316738 WNT7AO00755 349 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 SARM1Q6SZW1 724 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 DAGLBQ8NCG7 672 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 CEP95Q96GE4 821 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 DBNDD1Q9H9R9 158 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 USP40Q9NVE5 1235 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 ZNF500O60304 480 aaPredicted RBP12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 CRKP46108 304 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 CC2D2BQ6DHV5 1058 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 EHD4Q9H223 541 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 SWAP70Q9UH65 585 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 KCNH3Q9ULD8 1083 aa12.62□□□□□ -0.39
EFCAB11-201ENST00000316738 BAZ2BQ9UIF8 2168 aaKnown RBP12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 ECE2O60344 883 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 SNHG28P0DPA3 235 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 ERCC4Q92889 916 aaPredicted RBP12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 TRIM75PA6NK02 468 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 F8W031 263 aaPredicted RBP12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 SCNN1DP51172 638 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 KIAA2012Q0VF49 1180 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 LONRF3Q496Y0 759 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 KRBA2Q6ZNG9 492 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 METTL16Q86W50 562 aaKnown RBP12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 BRMS1Q9HCU9 246 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 MTMR4Q9NYA4 1195 aa12.61□□□□□ -0.39
EFCAB11-201ENST00000316738 BMP15O95972 392 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 SHMT1P34896 483 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 NLRP12P59046 1061 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 STXBP3O00186 592 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 CALML3P27482 149 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 NT5DC1Q5TFE4 455 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 PCDHA4Q9UN74 947 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 A0A087WWV3 80 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 ATP2C1P98194 919 aaPredicted RBP12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 WWC2Q6AWC2 1192 aa12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 FOXP4Q8IVH2 680 aaPredicted RBP12.6□□□□□ -0.39
EFCAB11-201ENST00000316738 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms