RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ATP6V0A2Q9Y487 856 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 CPLX1O14810 134 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 KIF23Q02241 960 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 HSP90AA4PQ58FG1 418 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 WDR66Q8TBY9 1149 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 STAG1Q8WVM7 1258 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 MXD3Q9BW11 206 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 ARFGAP3Q9NP61 516 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 FANCLQ9NW38 375 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 ZMYM6O95789 1325 aa19.58■□□□□ 0.72
SCAMP4-201ENST00000316097 UBE2Q2LH0YL09 131 aa19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 NPR1P16066 1061 aa19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 CDC27P30260 824 aa19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 DCP1AQ9NPI6 582 aaPredicted RBP19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 PDS5AQ29RF7 1337 aaKnown RBP19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 MAP3K9P80192 1104 aa19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 PDILTQ8N807 584 aa19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 SH3RF3Q8TEJ3 882 aaPredicted RBP19.57■□□□□ 0.72
SCAMP4-201ENST00000316097 ANKRD31Q8N7Z5 1873 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 DHX16O60231 1041 aaKnown RBP19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 USP17L8P0C7I0 530 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 PDE6BP35913 854 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 GYS2P54840 703 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 GTF2IP78347 998 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 MUM1L1Q5H9M0 696 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 APOA5Q6Q788 366 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 PARD6BQ9BYG5 372 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 MRFAP1Q9Y605 127 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 F8W031 263 aaPredicted RBP19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 SLC39A14Q15043 492 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 MFSD14BQ5SR56 506 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 C2CD5Q86YS7 1000 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 PHKBQ93100 1093 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 AIFM3Q96NN9 605 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 BAG1Q99933 345 aaPredicted RBP19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 INTS13Q9NVM9 706 aa19.56■□□□□ 0.72
SCAMP4-201ENST00000316097 TNS1Q9HBL0 1735 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 SPTY2D1Q68D10 685 aaPredicted RBP19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 CMTR1Q8N1G2 835 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 CCDC82Q8N4S0 544 aa19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 KRT23Q9C075 422 aa19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 RANBP6O60518 1105 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 IL1R1P14778 569 aa19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 METAP2P50579 478 aaKnown RBP eCLIP19.55■□□□□ 0.724e-7■■□□□ 12
SCAMP4-201ENST00000316097 ZSCAN26Q16670 478 aa19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 C15orf52Q6ZUT6 534 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 TOGARAM2Q6ZUX3 1019 aa19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 RSRC2Q7L4I2 434 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 CRNKL1Q9BZJ0 848 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 KCNQ5Q9NR82 932 aa19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 STK32BQ9NY57 414 aa19.55■□□□□ 0.72
SCAMP4-201ENST00000316097 SHC4Q6S5L8 630 aa19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 MASTLQ96GX5 879 aa19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 FUT8Q9BYC5 575 aa19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 CNNM2Q9H8M5 875 aa19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 BAZ2AQ9UIF9 1905 aaKnown RBP19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 HMGB2P26583 209 aaKnown RBP19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 DPP8Q6V1X1 898 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 TMEM87BQ96K49 555 aa19.54■□□□□ 0.72
SCAMP4-201ENST00000316097 GOLGA6L9A6NEM1 432 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 NMT2O60551 498 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 FAM47AQ5JRC9 791 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 TGFBRAP1Q8WUH2 860 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 DHX58Q96C10 678 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 HPSEQ9Y251 543 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 WDR19Q8NEZ3 1342 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 ALDH1B1P30837 517 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 ADKP55263 362 aaKnown RBP19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 RABGGTAQ92696 567 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 ZC3H12CQ9C0D7 883 aaKnown RBP19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 SLC12A7Q9Y666 1083 aa19.53■□□□□ 0.72
SCAMP4-201ENST00000316097 ZBTB43O43298 467 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 KARSQ15046 597 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 METTL16Q86W50 562 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 GOLGA1Q92805 767 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 KIFC2Q96AC6 838 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 CLIC6Q96NY7 704 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 DESI2Q9BSY9 194 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 ZSWIM4Q9H7M6 989 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 FAM217BQ9NTX9 383 aaPredicted RBP19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 USP5P45974 858 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 PDE4BQ07343 736 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 FBXO41Q8TF61 875 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 SAP30BPQ9UHR5 308 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-201ENST00000316097 LMAN1P49257 510 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 LONRF2Q1L5Z9 754 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 MAPKAPK5Q8IW41 473 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 IPO4Q8TEX9 1081 aaKnown RBP19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 NUP133Q8WUM0 1156 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 ANAPC4Q9UJX5 808 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 H0YIN7 160 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 H3BQF6 201 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 TBX2Q13207 712 aaPredicted RBP19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 WTAPQ15007 396 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 TC2NQ8N9U0 490 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 CCDC12Q8WUD4 166 aaPredicted RBP19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 RNF41Q9H4P4 317 aaPredicted RBP19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 DBNDD1Q9H9R9 158 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms