RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 KRT40Q6A162 431 aa15.06■□□□□ 0
RFFL-201ENST00000315249 SSH3Q8TE77 659 aa15.06■□□□□ 0
RFFL-201ENST00000315249 POLGP54098 1239 aaPredicted RBP15.06■□□□□ 0
RFFL-201ENST00000315249 TTLL1O95922 423 aa15.06■□□□□ 0
RFFL-201ENST00000315249 IFRD2Q12894 506 aaPredicted RBP15.06■□□□□ 0
RFFL-201ENST00000315249 ABI1Q8IZP0 508 aa15.06■□□□□ 0
RFFL-201ENST00000315249 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
RFFL-201ENST00000315249 CCDC114Q96M63 670 aa15.06■□□□□ 0
RFFL-201ENST00000315249 ZNF830Q96NB3 372 aaPredicted RBP15.06■□□□□ 0
RFFL-201ENST00000315249 PAIP2Q9BPZ3 127 aaKnown RBP15.06■□□□□ 0
RFFL-201ENST00000315249 MED10Q9BTT4 135 aa15.06■□□□□ 0
RFFL-201ENST00000315249 FERP16591 822 aa15.05■□□□□ 0
RFFL-201ENST00000315249 RASA3Q14644 834 aa15.05■□□□□ 0
RFFL-201ENST00000315249 DIXDC1Q155Q3 683 aa15.05■□□□□ 0
RFFL-201ENST00000315249 PLA2G4DQ86XP0 818 aa15.05■□□□□ 0
RFFL-201ENST00000315249 C8orf34Q49A92 452 aa15.05■□□□□ 0
RFFL-201ENST00000315249 CCDC17Q96LX7 622 aa15.05■□□□□ 0
RFFL-201ENST00000315249 IFNKQ9P0W0 207 aa15.05■□□□□ 0
RFFL-201ENST00000315249 SERPINB13Q9UIV8 391 aa15.05■□□□□ 0
RFFL-201ENST00000315249 ZBTB24O43167 697 aaPredicted RBP15.05■□□□□ -0
RFFL-201ENST00000315249 GAS8O95995 478 aa15.05■□□□□ -0
RFFL-201ENST00000315249 SLC27A3Q5K4L6 730 aa15.05■□□□□ -0
RFFL-201ENST00000315249 DDX25Q9UHL0 483 aaKnown RBP15.05■□□□□ -0
RFFL-201ENST00000315249 SPHKAPQ2M3C7 1700 aa15.05■□□□□ -0
RFFL-201ENST00000315249 A2ML1A8K2U0 1454 aa15.05■□□□□ -0
RFFL-201ENST00000315249 CYP27B1O15528 508 aa15.05■□□□□ -0
RFFL-201ENST00000315249 TNFAIP3P21580 790 aa15.05■□□□□ -0
RFFL-201ENST00000315249 TBC1D8BQ0IIM8 1120 aa15.05■□□□□ -0
RFFL-201ENST00000315249 ZBTB8OSQ8IWT0 167 aa15.05■□□□□ -0
RFFL-201ENST00000315249 CSGALNACT2Q8N6G5 542 aa15.05■□□□□ -0
RFFL-201ENST00000315249 INTS4Q96HW7 963 aaKnown RBP15.05■□□□□ -0
RFFL-201ENST00000315249 ATP10DQ9P241 1426 aa15.05■□□□□ -0
RFFL-201ENST00000315249 SLC16A2P36021 539 aa15.05■□□□□ -0
RFFL-201ENST00000315249 CACNB3P54284 484 aa15.05■□□□□ -0
RFFL-201ENST00000315249 SYNE4Q8N205 404 aa15.05■□□□□ -0
RFFL-201ENST00000315249 ADPGKQ9BRR6 497 aa15.05■□□□□ -0
RFFL-201ENST00000315249 AKT3Q9Y243 479 aa15.05■□□□□ -0
RFFL-201ENST00000315249 PI4KBQ9UBF8 816 aa15.05■□□□□ -0
RFFL-201ENST00000315249 RASAL2Q9UJF2 1139 aa15.05■□□□□ -0
RFFL-201ENST00000315249 LUC7L2Q9Y383 392 aaKnown RBP15.05■□□□□ -0
RFFL-201ENST00000315249 ZHX1Q9UKY1 873 aaPredicted RBP15.04■□□□□ -0
RFFL-201ENST00000315249 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
RFFL-201ENST00000315249 INF2Q27J81 1249 aa15.04■□□□□ -0
RFFL-201ENST00000315249 TXNDC16Q9P2K2 825 aa15.04■□□□□ -0
RFFL-201ENST00000315249 GPIHBP1Q8IV16 184 aa15.04■□□□□ -0
RFFL-201ENST00000315249 LRRIQ4A6NIV6 560 aa15.04■□□□□ -0
RFFL-201ENST00000315249 LEO1Q8WVC0 666 aaPredicted RBP15.04■□□□□ -0
RFFL-201ENST00000315249 GUCA1BQ9UMX6 200 aa15.04■□□□□ -0
RFFL-201ENST00000315249 CIAO1O76071 339 aa15.04■□□□□ -0
RFFL-201ENST00000315249 STAT2P52630 851 aa15.04■□□□□ -0
RFFL-201ENST00000315249 KRT83P78385 493 aa15.04■□□□□ -0
RFFL-201ENST00000315249 BLIDQ8IZY5 108 aa15.04■□□□□ -0
RFFL-201ENST00000315249 CCDC63Q8NA47 563 aa15.04■□□□□ -0
RFFL-201ENST00000315249 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
RFFL-201ENST00000315249 COA1Q9GZY4 146 aa15.04■□□□□ -0
RFFL-201ENST00000315249 ATL3Q6DD88 541 aa15.04■□□□□ -0
RFFL-201ENST00000315249 MMS19Q96T76 1030 aa15.04■□□□□ -0
RFFL-201ENST00000315249 TNS3Q68CZ2 1445 aa15.03■□□□□ -0
RFFL-201ENST00000315249 NOX5Q96PH1 765 aa15.03■□□□□ -0
RFFL-201ENST00000315249 IQCGQ9H095 443 aaKnown RBP15.03■□□□□ -0
RFFL-201ENST00000315249 TLR7Q9NYK1 1049 aaKnown RBP15.03■□□□□ -0
RFFL-201ENST00000315249 LIG4P49917 911 aa15.03■□□□□ -0
RFFL-201ENST00000315249 YARSP54577 528 aaKnown RBP15.03■□□□□ -0
RFFL-201ENST00000315249 NARFQ9UHQ1 456 aa15.03■□□□□ -0
RFFL-201ENST00000315249 GABPAQ06546 454 aa15.03■□□□□ -0
RFFL-201ENST00000315249 SMIM5Q71RC9 77 aa15.03■□□□□ -0
RFFL-201ENST00000315249 BBXQ8WY36 941 aaPredicted RBP15.03■□□□□ -0
RFFL-201ENST00000315249 CAPZA3Q96KX2 299 aa15.03■□□□□ -0
RFFL-201ENST00000315249 PPP1R9BQ96SB3 815 aa15.03■□□□□ -0
RFFL-201ENST00000315249 RIOK1Q9BRS2 568 aaKnown RBP15.03■□□□□ -0
RFFL-201ENST00000315249 TEKT3Q9BXF9 490 aa15.03■□□□□ -0
RFFL-201ENST00000315249 BLZF1Q9H2G9 400 aa15.03■□□□□ -0
RFFL-201ENST00000315249 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
RFFL-201ENST00000315249 TTLL3Q9Y4R7 772 aa15.03■□□□□ -0
RFFL-201ENST00000315249 FANCBQ8NB91 859 aa15.03■□□□□ -0
RFFL-201ENST00000315249 ZNF341Q9BYN7 854 aa15.03■□□□□ -0
RFFL-201ENST00000315249 KRT86O43790 486 aa15.03■□□□□ -0
RFFL-201ENST00000315249 SREK1Q8WXA9 508 aaKnown RBP15.03■□□□□ -0
RFFL-201ENST00000315249 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
RFFL-201ENST00000315249 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
RFFL-201ENST00000315249 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
RFFL-201ENST00000315249 SKILP12757 684 aa15.02■□□□□ -0
RFFL-201ENST00000315249 ADD1P35611 737 aaKnown RBP15.02■□□□□ -0
RFFL-201ENST00000315249 CYP2J2P51589 502 aa15.02■□□□□ -0
RFFL-201ENST00000315249 RPS6KC1Q96S38 1066 aa15.02■□□□□ -0
RFFL-201ENST00000315249 PCDHB13Q9Y5F0 798 aa15.02■□□□□ -0
RFFL-201ENST00000315249 POTEB2H3BUK9 544 aa15.02■□□□□ -0
RFFL-201ENST00000315249 ZEB2O60315 1214 aa15.02■□□□□ -0
RFFL-201ENST00000315249 CUTAO60888 179 aa15.02■□□□□ -0
RFFL-201ENST00000315249 PTH1RQ03431 593 aa15.02■□□□□ -0
RFFL-201ENST00000315249 CKAP4Q07065 602 aaKnown RBP15.02■□□□□ -0
RFFL-201ENST00000315249 ADD3Q9UEY8 706 aaKnown RBP15.02■□□□□ -0
RFFL-201ENST00000315249 FAM160B1Q5W0V3 765 aa15.02■□□□□ -0
RFFL-201ENST00000315249 CLEC4GQ6UXB4 293 aa15.02■□□□□ -0
RFFL-201ENST00000315249 GPBP1Q86WP2 473 aa15.02■□□□□ -0
RFFL-201ENST00000315249 COL15A1P39059 1388 aa15.02■□□□□ -0
RFFL-201ENST00000315249 NDC80O14777 642 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 PPP1R2P41236 205 aa15.02□□□□□ -0.01
RFFL-201ENST00000315249 KARSQ15046 597 aaKnown RBP15.02□□□□□ -0.01
RFFL-201ENST00000315249 UVSSAQ2YD98 709 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms