RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 Q6ZUG5 572 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 LRRC47Q8N1G4 583 aaKnown RBP14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 GMCL1P1Q8NEA9 526 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 IL27Q8NEV9 243 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 CCDC102AQ96A19 550 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 C12orf42Q96LP6 360 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 SH2D4AQ9H788 454 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 PDRG1Q9NUG6 133 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 MYH8P13535 1937 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 ATAD5Q96QE3 1844 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 A0A0G2JLL6 359 aaPredicted RBP14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 C19orf81C9J6K1 198 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 CAPN15O75808 1086 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 NEK4P51957 841 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 EVCP57679 992 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 ATP2B2Q01814 1243 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 MOGSQ13724 837 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 TOB2Q14106 344 aaPredicted RBP14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 DEFB115Q30KQ5 88 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 PRRT2Q7Z6L0 340 aaPredicted RBP14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 TMTC2Q8N394 836 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 MS4A4AQ96JQ5 239 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 FEZ1Q99689 392 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 EMILIN3Q9NT22 766 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 PHIPQ8WWQ0 1821 aa14.84□□□□□ -0.03
CHMP2A-201ENST00000312547 TESPA1A2RU30 521 aaPredicted RBP14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 F5H6K3 240 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 HSPA1AP0DMV8 641 aaKnown RBP14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 HSPA1BP0DMV9 641 aaKnown RBP14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 SNHG28P0DPA3 235 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 USP14P54578 494 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 KLRC3Q07444 240 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 SNAPC2Q13487 334 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 USP17L2Q6R6M4 530 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 PNMA1Q8ND90 353 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 BRF1Q92994 677 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 KAT14Q9H8E8 782 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 BRPF3Q9ULD4 1205 aa14.83□□□□□ -0.04
CHMP2A-201ENST00000312547 NDUFB10O96000 172 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 GTF2A2P52657 109 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 AK2P54819 239 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 HMGCS2P54868 508 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 TROAPQ12815 778 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 DGKZQ13574 1117 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 CYP4F22Q6NT55 531 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 LPAR1Q92633 364 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 GMCL1Q96IK5 515 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 GOPCQ9HD26 462 aa14.82□□□□□ -0.04
CHMP2A-201ENST00000312547 CCDC69A6NI79 296 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 DDAH1O94760 285 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 PDHBP11177 359 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 VCAM1P19320 739 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 FGD1P98174 961 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 MKRN3Q13064 507 aaKnown RBP14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 ANKRD1Q15327 319 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 ZYXQ15942 572 aaKnown RBP14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 SLFN13Q68D06 897 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 APOA5Q6Q788 366 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 ZNF654Q8IZM8 581 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 TNS4Q8IZW8 715 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 PROCA1Q8NCQ7 364 aaPredicted RBP14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 BRI3BPQ8WY22 251 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 CAPNS2Q96L46 248 aa14.81□□□□□ -0.04
CHMP2A-201ENST00000312547 KLF18A0A0U1RQI7 1052 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 MANSC4A6NHS7 340 aaPredicted RBP14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 CETPP11597 493 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 RCAN1P53805 252 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 APOBRQ0VD83 1088 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 NOGQ13253 232 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 GPAT2Q6NUI2 795 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 NFXL1Q6ZNB6 911 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 FASTKD5Q7L8L6 764 aaKnown RBP14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 RASGRP2Q7LDG7 609 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 CATIPQ7Z7H3 387 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 SPICE1Q8N0Z3 855 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 DCAF4Q8WV16 495 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 MAP3K14Q99558 947 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 TMOD4Q9NZQ9 345 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 SLC12A7Q9Y666 1083 aa14.8□□□□□ -0.04
CHMP2A-201ENST00000312547 CCL15-CCL14A0A0B4J2E2 113 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 WDR46O15213 610 aaKnown RBP14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 ST18O60284 1047 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 ZNF543Q08ER8 600 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 NID2Q14112 1375 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 GRM4Q14833 912 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 CCL15Q16663 113 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 PAXIP1Q6ZW49 1069 aaPredicted RBP14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 ZNF274Q96GC6 653 aaPredicted RBP14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 ZIC5Q96T25 663 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 PTPN18Q99952 460 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 MYL10Q9BUA6 226 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 TPCN1Q9ULQ1 816 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 HPS5Q9UPZ3 1129 aa14.79□□□□□ -0.04
CHMP2A-201ENST00000312547 WDR33Q9C0J8 1336 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 ZBTB43O43298 467 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 CALM1P0DP23 149 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms