RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PORCNQ9H237 461 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 KANSL2Q9H9L4 492 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 DOCK3Q8IZD9 2030 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 TAL1P17542 331 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-201ENST00000311943 HOXA7P31268 230 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-201ENST00000311943 PSMC4P43686 418 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 IRX3P78415 501 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-201ENST00000311943 PDE4BQ07343 736 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 CATSPERGQ6ZRH7 1159 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 CHST3Q7LGC8 479 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 ABHD8Q96I13 439 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 C12orf42Q96LP6 360 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 ESYT1Q9BSJ8 1104 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 DSCC1Q9BVC3 393 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 TANGO6Q9C0B7 1094 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 VCPKMTQ9H867 229 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 RLFQ13129 1914 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 F5H6K3 240 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 HIP1O00291 1037 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 ZNF213O14771 459 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 NDUFB10O96000 172 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 FGRP09769 529 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 SNAP25P60880 206 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 KLRC3Q07444 240 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 STX8Q9UNK0 236 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 PTCH2Q9Y6C5 1203 aa14.29□□□□□ -0.12
SCFD1-201ENST00000311943 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
SCFD1-201ENST00000311943 KDM4AO75164 1064 aa14.28□□□□□ -0.12
SCFD1-201ENST00000311943 OSBPP22059 807 aa14.28□□□□□ -0.12
SCFD1-201ENST00000311943 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
SCFD1-201ENST00000311943 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
SCFD1-201ENST00000311943 EFCC1Q9HA90 598 aa14.28□□□□□ -0.12
SCFD1-201ENST00000311943 SENP2Q9HC62 589 aa14.28□□□□□ -0.12
SCFD1-201ENST00000311943 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
SCFD1-201ENST00000311943 ZCCHC17Q9NP64 241 aaKnown RBP14.28□□□□□ -0.12
SCFD1-201ENST00000311943 GINM1Q9NU53 330 aa14.28□□□□□ -0.12
SCFD1-201ENST00000311943 MYH4Q9Y623 1939 aa14.27□□□□□ -0.12
SCFD1-201ENST00000311943 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.12
SCFD1-201ENST00000311943 PRKCZQ05513 592 aa14.27□□□□□ -0.12
SCFD1-201ENST00000311943 RCSD1Q6JBY9 416 aa14.27□□□□□ -0.12
SCFD1-201ENST00000311943 CYB5R4Q7L1T6 521 aa14.27□□□□□ -0.12
SCFD1-201ENST00000311943 STAG1Q8WVM7 1258 aa14.27□□□□□ -0.12
SCFD1-201ENST00000311943 NOM1Q5C9Z4 860 aaKnown RBP14.27□□□□□ -0.13
SCFD1-201ENST00000311943 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.13
SCFD1-201ENST00000311943 SH3TC2Q8TF17 1288 aa14.27□□□□□ -0.13
SCFD1-201ENST00000311943 TBC1D2Q9BYX2 928 aa14.27□□□□□ -0.13
SCFD1-201ENST00000311943 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
SCFD1-201ENST00000311943 ZSWIM5Q9P217 1185 aa14.27□□□□□ -0.13
SCFD1-201ENST00000311943 HPS5Q9UPZ3 1129 aa14.27□□□□□ -0.13
SCFD1-201ENST00000311943 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.13
SCFD1-201ENST00000311943 RBM8AQ9Y5S9 174 aaKnown RBP14.27□□□□□ -0.13
SCFD1-201ENST00000311943 CCDC85CA6NKD9 419 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 ORC4O43929 436 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 FLOT1O75955 427 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 MCCP23508 829 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 KCTD1Q719H9 257 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 MAP4K1Q92918 833 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 ERO1AQ96HE7 468 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 NYAP2Q9P242 653 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 PTPN22Q9Y2R2 807 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 ZMYM6O95789 1325 aa14.26□□□□□ -0.13
SCFD1-201ENST00000311943 SLC3A2P08195 630 aaKnown RBP14.25□□□□□ -0.13
SCFD1-201ENST00000311943 USP14P54578 494 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 ANO2Q9NQ90 1003 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 TAOK2Q9UL54 1235 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 TTLL1O95922 423 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
SCFD1-201ENST00000311943 TMEM47Q9BQJ4 181 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 PLIN4Q96Q06 1357 aa14.25□□□□□ -0.13
SCFD1-201ENST00000311943 MGAMO43451 1857 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 FRMPD2Q68DX3 1309 aaPredicted RBP14.24□□□□□ -0.13
SCFD1-201ENST00000311943 PARP14Q460N5 1801 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 ELNP15502 786 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 SLC4A3P48751 1232 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 IMMTQ16891 758 aaKnown RBP14.24□□□□□ -0.13
SCFD1-201ENST00000311943 FAM110CQ1W6H9 321 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 TICAM2Q86XR7 235 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 PNMA3Q9UL41 463 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 ISY1Q9ULR0 285 aaKnown RBP14.24□□□□□ -0.13
SCFD1-201ENST00000311943 RAD50Q92878 1312 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 SLC16A2P36021 539 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 FLT3LGP49771 235 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 SOX10P56693 466 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 ERVK-9P63128 1117 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 ERVK-24P63145 666 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 TRIM32Q13049 653 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 COG2Q14746 738 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms