RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 CYTH3O43739 400 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 AKR1B1P15121 316 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 CCDC93Q567U6 631 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 SHC4Q6S5L8 630 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 SERPINB13Q9UIV8 391 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 MTMR7Q9Y216 660 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 SIPA1L1O43166 1804 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 PSME4Q14997 1843 aa18.38■□□□□ 0.53
DEPDC7-202ENST00000311388 IGKV6D-41A0A0C4DH26 115 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 ADAMTS3O15072 1205 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 CTAGE5O15320 804 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 SLURP2P0DP57 97 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 PFKFB1P16118 471 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 SHMT1P34896 483 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 GNAQP50148 359 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 CLIC6Q96NY7 704 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 FAM198AQ9UFP1 575 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 SERPINA10Q9UK55 444 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 COL4A5P29400 1685 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 JMYQ8N9B5 988 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 SWAP70Q9UH65 585 aa18.37■□□□□ 0.53
DEPDC7-202ENST00000311388 CUTAO60888 179 aa18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 RBM5P52756 815 aaKnown RBP eCLIP18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 GRIPAP1Q4V328 841 aa18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 PSMD1Q99460 953 aa18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 MTMR4Q9NYA4 1195 aa18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 HPSEQ9Y251 543 aa18.36■□□□□ 0.53
DEPDC7-202ENST00000311388 ANO6Q4KMQ2 910 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 SASS6Q6UVJ0 657 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 IDI2Q9BXS1 227 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 MYO3BQ8WXR4 1341 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 GREB1LQ9C091 1923 aaPredicted RBP18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 FAM237AA0A1B0GTK4 181 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 ZNF202O95125 648 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 TCP10Q12799 353 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 RESP18Q5W5W9 173 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 SH3BP5LQ7L8J4 393 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 CLEC10AQ8IUN9 316 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 EHD4Q9H223 541 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 DNAJC18Q9H819 358 aa18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 FBXO2Q9UK22 296 aaPredicted RBP18.35■□□□□ 0.53
DEPDC7-202ENST00000311388 DDTLA6NHG4 134 aaPredicted RBP18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 KLRF2D3W0D1 207 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 WNT7AO00755 349 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 ZBTB7AO95365 584 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 ATP2B1P20020 1258 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 NLRP5P59047 1200 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 GRIN1Q05586 938 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 TYW1BQ6NUM6 668 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 USP17L2Q6R6M4 530 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 FAM200AQ8TCP9 573 aa18.34■□□□□ 0.53
DEPDC7-202ENST00000311388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 USP17L5A8MUK1 530 aa18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 PARP1P09874 1014 aaKnown RBP18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 PTPREP23469 700 aa18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 KRI1Q8N9T8 703 aaKnown RBP18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 ERCC4Q92889 916 aaPredicted RBP18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 BRMS1Q9HCU9 246 aa18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 SH3GLB2Q9NR46 395 aa18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 ZNF277Q9NRM2 450 aaPredicted RBP18.33■□□□□ 0.53
DEPDC7-202ENST00000311388 WWC2Q6AWC2 1192 aa18.33■□□□□ 0.52
DEPDC7-202ENST00000311388 SPZ1Q9BXG8 430 aa18.33■□□□□ 0.52
DEPDC7-202ENST00000311388 CBX8Q9HC52 389 aa18.33■□□□□ 0.52
DEPDC7-202ENST00000311388 USP25Q9UHP3 1055 aa18.33■□□□□ 0.52
DEPDC7-202ENST00000311388 AP5Z1O43299 807 aa18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 CFAP100Q494V2 611 aa18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 PRMT6Q96LA8 375 aaPredicted RBP18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 SDF4Q9BRK5 362 aa18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 DNAJC25Q9H1X3 360 aa18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 TDRD3Q9H7E2 651 aaKnown RBP18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 A0A087WWV3 80 aa18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 TRIM75PA6NK02 468 aa18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 EIF6P56537 245 aaKnown RBP18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 LARGE2Q8N3Y3 721 aa18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 DHX36Q9H2U1 1008 aaKnown RBP18.32■□□□□ 0.52
DEPDC7-202ENST00000311388 FAM196BA6NMK8 535 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 STXBP3O00186 592 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 RAD17O75943 681 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 PDHBP11177 359 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 SYKP43405 635 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 RSBN1LQ6PCB5 846 aaPredicted RBP18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 LUZP1Q86V48 1076 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 GMLQ99445 158 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 CLIP2Q9UDT6 1046 aa18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 MORC2Q9Y6X9 1032 aaPredicted RBP18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 GOLGB1Q14789 3259 aaKnown RBP18.31■□□□□ 0.52
DEPDC7-202ENST00000311388 M0R2N6 131 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms