RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 IPO4Q8TEX9 1081 aaKnown RBP15.29■□□□□ 0.04
NPAS4-201ENST00000311034 GBP3Q9H0R5 595 aa15.29■□□□□ 0.04
NPAS4-201ENST00000311034 ADD3Q9UEY8 706 aaKnown RBP15.29■□□□□ 0.04
NPAS4-201ENST00000311034 SRPRBQ9Y5M8 271 aaKnown RBP15.29■□□□□ 0.04
NPAS4-201ENST00000311034 MAP2K7O14733 419 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 IL2RBP14784 551 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 IFNAR1P17181 557 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 PIP4K2BP78356 416 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 EVX2Q03828 476 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 KRT31Q15323 416 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 CTR9Q6PD62 1173 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 L1RE1Q9UN81 338 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 TTF2Q9UNY4 1162 aaKnown RBP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 RNF40O75150 1001 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 XBP1P17861 261 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 TTC19Q6DKK2 380 aaPredicted RBP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 CTAGE1Q96RT6 745 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 CCDC122Q5T0U0 273 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 NOC3LQ8WTT2 800 aaKnown RBP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 CRACR2AQ9BSW2 395 aa15.28■□□□□ 0.04
NPAS4-201ENST00000311034 AATFQ9NY61 560 aaKnown RBP eCLIP15.28■□□□□ 0.04
NPAS4-201ENST00000311034 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
NPAS4-201ENST00000311034 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.04
NPAS4-201ENST00000311034 DPYDQ12882 1025 aa15.27■□□□□ 0.04
NPAS4-201ENST00000311034 FANCBQ8NB91 859 aa15.27■□□□□ 0.04
NPAS4-201ENST00000311034 MACROD2A1Z1Q3 448 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 SARSP49591 514 aaKnown RBP15.27■□□□□ 0.03
NPAS4-201ENST00000311034 CRACR2BQ8N4Y2 399 aaPredicted RBP15.27■□□□□ 0.03
NPAS4-201ENST00000311034 TRIML1Q8N9V2 468 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 TTLL11Q8NHH1 800 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 GPKOWQ92917 476 aaPredicted RBP eCLIP15.27■□□□□ 0.03
NPAS4-201ENST00000311034 NAA15Q9BXJ9 866 aaKnown RBP15.27■□□□□ 0.03
NPAS4-201ENST00000311034 KRT23Q9C075 422 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 CENPHQ9H3R5 247 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 JADE2Q9NQC1 790 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 ABHD10Q9NUJ1 306 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 TACC3Q9Y6A5 838 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 WNT7AO00755 349 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 ARID5AQ03989 594 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 TTC31Q49AM3 519 aaPredicted RBP15.27■□□□□ 0.03
NPAS4-201ENST00000311034 CYP26C1Q6V0L0 522 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 TMTC1Q8IUR5 882 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 PIGBQ92521 554 aa15.27■□□□□ 0.03
NPAS4-201ENST00000311034 FOXP1Q9H334 677 aaPredicted RBP15.27■□□□□ 0.03
NPAS4-201ENST00000311034 GNL3LQ9NVN8 582 aaKnown RBP15.27■□□□□ 0.03
NPAS4-201ENST00000311034 FAM237AA0A1B0GTK4 181 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 PATL2C9JE40 543 aaKnown RBP15.26■□□□□ 0.03
NPAS4-201ENST00000311034 ATP6V1AP38606 617 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 EIF5P55010 431 aaKnown RBP15.26■□□□□ 0.03
NPAS4-201ENST00000311034 RASGRP2Q7LDG7 609 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 AFAP1L1Q8TED9 768 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 NELFBQ8WX92 580 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 GDAQ9Y2T3 454 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 CCDC196A0A1B0GTZ2 297 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 TRIM49BA6NDI0 452 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 TSPY2A6NKD2 308 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 F8W031 263 aaPredicted RBP15.26■□□□□ 0.03
NPAS4-201ENST00000311034 KRT2P35908 639 aa15.26■□□□□ 0.03
NPAS4-201ENST00000311034 IFIT1BQ5T764 474 aaKnown RBP15.26■□□□□ 0.03
NPAS4-201ENST00000311034 GPR101Q96P66 508 aaPredicted RBP15.26■□□□□ 0.03
NPAS4-201ENST00000311034 EIF3CLB5ME19 914 aaKnown RBP15.25■□□□□ 0.03
NPAS4-201ENST00000311034 KCNJ18B7U540 433 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 GTF2A1P52655 376 aaPredicted RBP15.25■□□□□ 0.03
NPAS4-201ENST00000311034 COPB1P53618 953 aaKnown RBP15.25■□□□□ 0.03
NPAS4-201ENST00000311034 CUL4BQ13620 913 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 KCNJ12Q14500 433 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 UBE3CQ15386 1083 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 EIF3CQ99613 913 aaKnown RBP15.25■□□□□ 0.03
NPAS4-201ENST00000311034 TANGO6Q9C0B7 1094 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 WDR19Q8NEZ3 1342 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 IPO7O95373 1038 aaKnown RBP15.25■□□□□ 0.03
NPAS4-201ENST00000311034 SLC5A1P13866 664 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 IDEP14735 1019 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 PTGDRQ13258 359 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 WHAMMP3Q1A5X7 153 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 MICALL1Q8N3F8 863 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 FAM71BQ8TC56 605 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 CNNM2Q9H8M5 875 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 BRMS1Q9HCU9 246 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 ATG3Q9NT62 314 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 PLEKHA8P1O95397 391 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 MMS19Q96T76 1030 aa15.25■□□□□ 0.03
NPAS4-201ENST00000311034 SAP30BPQ9UHR5 308 aaKnown RBP15.25■□□□□ 0.03
NPAS4-201ENST00000311034 EPN1Q9Y6I3 576 aaPredicted RBP15.25■□□□□ 0.03
NPAS4-201ENST00000311034 ATP1A1P05023 1023 aaKnown RBP15.24■□□□□ 0.03
NPAS4-201ENST00000311034 LIFRP42702 1097 aa15.24■□□□□ 0.03
NPAS4-201ENST00000311034 PAK1Q13153 545 aa15.24■□□□□ 0.03
NPAS4-201ENST00000311034 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
NPAS4-201ENST00000311034 TNKSO95271 1327 aa15.24■□□□□ 0.03
NPAS4-201ENST00000311034 USP17L12C9JPN9 530 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms