RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 ZNF213O14771 459 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 LRRC23Q53EV4 343 aaPredicted RBP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 KRT27Q7Z3Y8 459 aa11.73□□□□□ -0.53
MSRB3-201ENST00000308259 CMTR1Q8N1G2 835 aaKnown RBP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 ZNF274Q96GC6 653 aaPredicted RBP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
MSRB3-201ENST00000308259 MYBL1P10243 752 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 PFKFB1P16118 471 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 KCNA4P22459 653 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 ADALQ6DHV7 355 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 RIN2Q8WYP3 895 aaPredicted RBP11.72□□□□□ -0.53
MSRB3-201ENST00000308259 CCNL1Q9UK58 526 aaPredicted RBP11.72□□□□□ -0.53
MSRB3-201ENST00000308259 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 PNOCQ13519 176 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 CNNM1Q9NRU3 951 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 B4E1Z4 1266 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 IGHMBP2P38935 993 aaKnown RBP11.72□□□□□ -0.53
MSRB3-201ENST00000308259 MATR3P43243 847 aaKnown RBP eCLIP11.72□□□□□ -0.53
MSRB3-201ENST00000308259 SARM1Q6SZW1 724 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 CAPZA3Q96KX2 299 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 FAM210AQ96ND0 272 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 TMEM165Q9HC07 324 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 RTEL1Q9NZ71 1219 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 GOLGA6BA6NDN3 693 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 CDC25BP30305 580 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 METTL24Q5JXM2 366 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 SLC9C2Q5TAH2 1124 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 DPF2Q92785 391 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 FAM53CQ9NYF3 392 aa11.72□□□□□ -0.53
MSRB3-201ENST00000308259 CTAGE9A4FU28 777 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 ZMYND10O75800 440 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 ADCY2Q08462 1091 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 CYB5R4Q7L1T6 521 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 FAM114A1Q8IWE2 563 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 AMOTL1Q8IY63 956 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 BAG1Q99933 345 aaPredicted RBP11.71□□□□□ -0.53
MSRB3-201ENST00000308259 AGXT2Q9BYV1 514 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 IMPACTQ9P2X3 320 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 MST1RQ04912 1400 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 KLHL33A6NCF5 533 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 MYO1EQ12965 1108 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 FBXO41Q8TF61 875 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
MSRB3-201ENST00000308259 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 PPP2R2CQ9Y2T4 447 aa11.71□□□□□ -0.53
MSRB3-201ENST00000308259 MRC1P22897 1456 aa11.71□□□□□ -0.54
MSRB3-201ENST00000308259 FOXN1O15353 648 aa11.71□□□□□ -0.54
MSRB3-201ENST00000308259 PDCD2Q16342 344 aaPredicted RBP11.71□□□□□ -0.54
MSRB3-201ENST00000308259 ANO1Q5XXA6 986 aa11.71□□□□□ -0.54
MSRB3-201ENST00000308259 TAX1BP1Q86VP1 789 aa11.71□□□□□ -0.54
MSRB3-201ENST00000308259 CCDC50Q8IVM0 306 aa11.71□□□□□ -0.54
MSRB3-201ENST00000308259 ALG1Q9BT22 464 aa11.71□□□□□ -0.54
MSRB3-201ENST00000308259 POLD4Q9HCU8 107 aa11.71□□□□□ -0.54
MSRB3-201ENST00000308259 CDC27P30260 824 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 MCAMP43121 646 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 TRIM68Q6AZZ1 485 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 MB21D2Q8IYB1 491 aaPredicted RBP11.7□□□□□ -0.54
MSRB3-201ENST00000308259 NCOA7Q8NI08 942 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 ZKSCAN4Q969J2 545 aaPredicted RBP11.7□□□□□ -0.54
MSRB3-201ENST00000308259 CHD2O14647 1828 aaKnown RBP11.7□□□□□ -0.54
MSRB3-201ENST00000308259 SLC8A1P32418 973 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 KIF23Q02241 960 aaPredicted RBP11.7□□□□□ -0.54
MSRB3-201ENST00000308259 TRIM74Q86UV6 250 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 TRIM73Q86UV7 250 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 NYXQ9GZU5 481 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 PICK1Q9NRD5 415 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 TRMT112Q9UI30 125 aaKnown RBP11.7□□□□□ -0.54
MSRB3-201ENST00000308259 APBA3O96018 575 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 KIF5BP33176 963 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 LDHAL6AQ6ZMR3 332 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 SLIT3O75094 1523 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 TMEM232C9JQI7 657 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 MCM3P25205 808 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 IFIT5Q13325 482 aaKnown RBP11.7□□□□□ -0.54
MSRB3-201ENST00000308259 KCNB1Q14721 858 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 VPS72Q15906 364 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
MSRB3-201ENST00000308259 SRGAP1Q7Z6B7 1085 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 GREM2Q9H772 168 aa11.7□□□□□ -0.54
MSRB3-201ENST00000308259 CCDC175P0C221 793 aa11.69□□□□□ -0.54
MSRB3-201ENST00000308259 HLFQ16534 295 aa11.69□□□□□ -0.54
MSRB3-201ENST00000308259 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
MSRB3-201ENST00000308259 CCDC26Q8TAB7 109 aa11.69□□□□□ -0.54
MSRB3-201ENST00000308259 ZNHIT6Q9NWK9 470 aaKnown RBP11.69□□□□□ -0.54
MSRB3-201ENST00000308259 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
MSRB3-201ENST00000308259 NEDD4P46934 1319 aa11.69□□□□□ -0.54
MSRB3-201ENST00000308259 AFDNP55196 1824 aaKnown RBP11.69□□□□□ -0.54
MSRB3-201ENST00000308259 METAP2P50579 478 aaKnown RBP eCLIP11.69□□□□□ -0.54
MSRB3-201ENST00000308259 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms