RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PAIP2Q9BPZ3 127 aaKnown RBP9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 TRIM7Q9C029 511 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC88AQ3V6T2 1871 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 TTLL1O95922 423 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 FERMT3Q86UX7 667 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 ZBTB1Q9Y2K1 713 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 N4BP3O15049 544 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 HSPA4P34932 840 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 SERPINB13Q9UIV8 391 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 TUBB4AP04350 444 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 YWHAEP62258 255 aaKnown RBP9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 SPOUT1Q5T280 376 aaKnown RBP9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 USP44Q9H0E7 712 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 GINM1Q9NU53 330 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 PRKAG2Q9UGJ0 569 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 HSPA1LP34931 641 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 KIFAP3Q92845 792 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 PXDNLA1KZ92 1463 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 GUCY1B3Q02153 619 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 INF2Q27J81 1249 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 SRGAP1Q7Z6B7 1085 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 CRAMP1Q96RY5 1269 aa9.28□□□□□ -0.92
PCDHB1-201ENST00000306549 MCM4P33991 863 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 C20orf194Q5TEA3 1177 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 FAM160B2Q86V87 743 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 MYH3P11055 1940 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 LAD1O00515 517 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 RPS6KB1P23443 525 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 ATP6V0A2Q9Y487 856 aa9.27□□□□□ -0.92
PCDHB1-201ENST00000306549 RFX7Q2KHR2 1363 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 GABPAQ06546 454 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 WDR44Q5JSH3 913 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 SV2BQ7L1I2 683 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 RPUSD2Q8IZ73 545 aaKnown RBP9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 MAGEF1Q9HAY2 307 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 PNPLA6Q8IY17 1366 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 TGFBRAP1Q8WUH2 860 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 MRPS27Q92552 414 aaKnown RBP9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 FBXO40Q9UH90 709 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 SP8Q8IXZ3 490 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 CCDC94Q9BW85 323 aaPredicted RBP9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 MYH6P13533 1939 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 KCTD2Q14681 263 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 NOX5Q96PH1 765 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 IQSEC2Q5JU85 1478 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 PTPDC1A2A3K4 754 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 SPTLC2O15270 562 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 RPS12P25398 132 aaKnown RBP9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 ICA1Q05084 483 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 SEPT6Q14141 434 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 MUM1L1Q5H9M0 696 aa9.27□□□□□ -0.93
PCDHB1-201ENST00000306549 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 CSRNP1Q96S65 589 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 MIS12Q9H081 205 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 SGSM2O43147 1006 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 VWA3BQ502W6 1294 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 DBNDD2Q9BQY9 259 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 ERICH4A6NGS2 130 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 TAF5LO75529 589 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 FAM160B1Q5W0V3 765 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 E7EVH7 732 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 CCT6AP40227 531 aaKnown RBP9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 FNBP1Q96RU3 617 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 VPS33BQ9H267 617 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 ABT1Q9ULW3 272 aaKnown RBP9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 ARHGEF35A5YM69 484 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 ARHGEF16Q5VV41 709 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 HERC5Q9UII4 1024 aaKnown RBP9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 TACC3Q9Y6A5 838 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 TACC1O75410 805 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 GCFC2P16383 781 aaKnown RBP9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 PDE6AP16499 860 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 ASIC1P78348 528 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 FASTKD5Q7L8L6 764 aaKnown RBP9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 KIAA0825Q8IV33 1275 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF274Q96GC6 653 aaPredicted RBP9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 DLG5Q8TDM6 1919 aa9.26□□□□□ -0.93
PCDHB1-201ENST00000306549 DAPK3O43293 454 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 CALUO43852 315 aaPredicted RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 UVSSAQ2YD98 709 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 AP5M1Q9H0R1 490 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 DNM3Q9UQ16 869 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 COL14A1Q05707 1796 aaKnown RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 CCDC160A6NGH7 325 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 XPOTO43592 962 aaKnown RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 EPB41P11171 864 aaKnown RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 FAM81BQ96LP2 452 aa9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 MTRF1LQ9UGC7 380 aaKnown RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 SAP30BPQ9UHR5 308 aaKnown RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF142P52746 1687 aaPredicted RBP9.25□□□□□ -0.93
PCDHB1-201ENST00000306549 GJC1P36383 396 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms