RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CCZ1P86791 482 aaPredicted RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 FAM107BQ9H098 131 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 FAM205CA6NFA0 338 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 RBM5P52756 815 aaKnown RBP eCLIP15.86■□□□□ 0.138e-10■□□□□ 10.2
SDC2-201ENST00000302190 GRIN1Q05586 938 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 PTGDRQ13258 359 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 MTF1Q14872 753 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 TSGA10IPQ3SY00 556 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 CCDC122Q5T0U0 273 aa15.86■□□□□ 0.13
SDC2-201ENST00000302190 SPTY2D1Q68D10 685 aaPredicted RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 SYMPKQ92797 1274 aaKnown RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
SDC2-201ENST00000302190 GOLGA8HP0CJ92 632 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 CASP14P31944 242 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
SDC2-201ENST00000302190 MB21D2Q8IYB1 491 aaPredicted RBP15.85■□□□□ 0.13
SDC2-201ENST00000302190 CDCA7Q9BWT1 371 aaPredicted RBP15.85■□□□□ 0.13
SDC2-201ENST00000302190 SRRTQ9BXP5 876 aaKnown RBP15.85■□□□□ 0.13
SDC2-201ENST00000302190 GNPATO15228 680 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 ZMYND10O75800 440 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 PICALMQ13492 652 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 ANKRD7Q92527 254 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 SEPT11Q9NVA2 429 aaKnown RBP15.85■□□□□ 0.13
SDC2-201ENST00000302190 MAN1B1Q9UKM7 699 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 KIF5BP33176 963 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 NAPAP54920 295 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 ANTXR2P58335 489 aa15.85■□□□□ 0.13
SDC2-201ENST00000302190 LUC7L2Q9Y383 392 aaKnown RBP15.85■□□□□ 0.13
SDC2-201ENST00000302190 DOT1LQ8TEK3 1739 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 C6orf229H3BNL8 230 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 RAD51AP2Q09MP3 1159 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 KCPQ6ZWJ8 1503 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 CDC25BP30305 580 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 WWC2Q6AWC2 1192 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 SARM1Q6SZW1 724 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 TOGARAM2Q6ZUX3 1019 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 ACRBPQ8NEB7 543 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 SMARCC1Q92922 1105 aaPredicted RBP15.84■□□□□ 0.13
SDC2-201ENST00000302190 SMC1AQ14683 1233 aaKnown RBP15.84■□□□□ 0.13
SDC2-201ENST00000302190 INTS5Q6P9B9 1019 aaKnown RBP15.84■□□□□ 0.13
SDC2-201ENST00000302190 DTHD1Q6ZMT9 781 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 CTAGE1Q96RT6 745 aa15.84■□□□□ 0.13
SDC2-201ENST00000302190 STRBPQ96SI9 672 aaKnown RBP15.84■□□□□ 0.13
SDC2-201ENST00000302190 MAP3K15Q6ZN16 1313 aa15.83■□□□□ 0.13
SDC2-201ENST00000302190 PSMA7O14818 248 aa15.83■□□□□ 0.13
SDC2-201ENST00000302190 MRPS25P82663 173 aaKnown RBP15.83■□□□□ 0.13
SDC2-201ENST00000302190 CTR9Q6PD62 1173 aa15.83■□□□□ 0.13
SDC2-201ENST00000302190 GPR108Q9NPR9 543 aa15.83■□□□□ 0.13
SDC2-201ENST00000302190 EXOC1Q9NV70 894 aa15.83■□□□□ 0.13
SDC2-201ENST00000302190 PTPROQ16827 1216 aa15.83■□□□□ 0.12
SDC2-201ENST00000302190 KRT27Q7Z3Y8 459 aa15.83■□□□□ 0.12
SDC2-201ENST00000302190 CIAO1O76071 339 aa15.83■□□□□ 0.12
SDC2-201ENST00000302190 GNAT2P19087 354 aa15.83■□□□□ 0.12
SDC2-201ENST00000302190 TCERG1LQ5VWI1 586 aa15.83■□□□□ 0.12
SDC2-201ENST00000302190 DDX41Q9UJV9 622 aaKnown RBP15.83■□□□□ 0.12
SDC2-201ENST00000302190 NRAPQ86VF7 1730 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 MROH7-TTC4A0A0A0MT08 1334 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 TEX33O43247 280 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 PLEKHA8P1O95397 391 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 RBL2Q08999 1139 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 TBC1D8BQ0IIM8 1120 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 UBE3CQ15386 1083 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 POTEAQ6S8J7 498 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 LRRC4BQ9NT99 713 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 CCDC87Q9NVE4 849 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 NMT2O60551 498 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 CHRNDQ07001 517 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 DYMQ7RTS9 669 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 LRRN4CLQ8ND94 238 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 ENGASEQ8NFI3 743 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 NELFBQ8WX92 580 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 CPVLQ9H3G5 476 aa15.82■□□□□ 0.12
SDC2-201ENST00000302190 TFAP4Q01664 338 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 CNGA4Q8IV77 575 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 ANKRD13CQ8N6S4 541 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 WDR24Q96S15 920 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 ABCC6O95255 1503 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 PSDA5PKW4 1024 aaPredicted RBP15.81■□□□□ 0.12
SDC2-201ENST00000302190 BRD2P25440 801 aaKnown RBP15.81■□□□□ 0.12
SDC2-201ENST00000302190 CCDC42Q96M95 316 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 UBN2Q6ZU65 1347 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 ANKRD65E5RJM6 399 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 TXKP42681 527 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 TNNI2P48788 182 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 PAK1Q13153 545 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 SLC51AQ86UW1 340 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 METTL16Q86W50 562 aaKnown RBP15.81■□□□□ 0.12
SDC2-201ENST00000302190 VSTM4Q8IW00 320 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 KCNB2Q92953 911 aa15.81■□□□□ 0.12
SDC2-201ENST00000302190 GLI3P10071 1580 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 COL15A1P39059 1388 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 MMP1P03956 469 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 GTF2A1P52655 376 aaPredicted RBP15.8■□□□□ 0.12
SDC2-201ENST00000302190 SLC20A2Q08357 652 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 INF2Q27J81 1249 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 GBP3Q9H0R5 595 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms