RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 AXDND1Q5T1B0 1012 aaPredicted RBP25.7■■□□□ 1.7
SMAD1-201ENST00000302085 EHD4Q9H223 541 aa25.7■■□□□ 1.7
SMAD1-201ENST00000302085 TNMDQ9H2S6 317 aa25.7■■□□□ 1.7
SMAD1-201ENST00000302085 MTMR4Q9NYA4 1195 aa25.7■■□□□ 1.7
SMAD1-201ENST00000302085 PSMD14O00487 310 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 MAP3K11Q16584 847 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 SOGA3Q5TF21 947 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 SH3BP5LQ7L8J4 393 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 PRMT6Q96LA8 375 aaPredicted RBP25.69■■□□□ 1.7
SMAD1-201ENST00000302085 TDRD3Q9H7E2 651 aaKnown RBP25.69■■□□□ 1.7
SMAD1-201ENST00000302085 MYO3BQ8WXR4 1341 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 PSME4Q14997 1843 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 DDTLA6NHG4 134 aaPredicted RBP25.69■■□□□ 1.7
SMAD1-201ENST00000302085 NPY5RQ15761 445 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 CCDC73Q6ZRK6 1079 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 RBM43Q6ZSC3 357 aaKnown RBP25.69■■□□□ 1.7
SMAD1-201ENST00000302085 RNF214Q8ND24 703 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 GMLQ99445 158 aa25.69■■□□□ 1.7
SMAD1-201ENST00000302085 DHX36Q9H2U1 1008 aaKnown RBP25.69■■□□□ 1.7
SMAD1-201ENST00000302085 MARCKSP29966 332 aaPredicted RBP25.68■■□□□ 1.7
SMAD1-201ENST00000302085 KRT2P35908 639 aa25.68■■□□□ 1.7
SMAD1-201ENST00000302085 R3HDM1Q15032 1099 aaKnown RBP25.68■■□□□ 1.7
SMAD1-201ENST00000302085 RASGRP2Q7LDG7 609 aa25.68■■□□□ 1.7
SMAD1-201ENST00000302085 MRPS27Q92552 414 aaKnown RBP25.68■■□□□ 1.7
SMAD1-201ENST00000302085 CYTH3O43739 400 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 GOLGA8HP0CJ92 632 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 FAM160A1Q05DH4 1040 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 DALRD3Q5D0E6 543 aaKnown RBP25.67■■□□□ 1.7
SMAD1-201ENST00000302085 PPP6R2O75170 966 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 RILPL1Q5EBL4 403 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 CKAP2LQ8IYA6 745 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 LZTS2Q9BRK4 669 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 DNAJC18Q9H819 358 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 CABP5Q9NP86 173 aa25.67■■□□□ 1.7
SMAD1-201ENST00000302085 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.66■■□□□ 1.7
SMAD1-201ENST00000302085 ZNRF3Q9ULT6 936 aa25.66■■□□□ 1.7
SMAD1-201ENST00000302085 A0A1B0GVL5 298 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 KLRF2D3W0D1 207 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 EARS2Q5JPH6 523 aaKnown RBP25.65■■□□□ 1.7
SMAD1-201ENST00000302085 USP17L2Q6R6M4 530 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 FMR1NBQ8N0W7 255 aaPredicted RBP25.65■■□□□ 1.7
SMAD1-201ENST00000302085 TNFRSF25Q93038 417 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 PI4KBQ9UBF8 816 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 FAM205CA6NFA0 338 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 PARP1P09874 1014 aaKnown RBP25.65■■□□□ 1.7
SMAD1-201ENST00000302085 NDUFA8P51970 172 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 CLEC10AQ8IUN9 316 aa25.65■■□□□ 1.7
SMAD1-201ENST00000302085 MYH8P13535 1937 aa25.64■■□□□ 1.7
SMAD1-201ENST00000302085 USP17L5A8MUK1 530 aa25.64■■□□□ 1.7
SMAD1-201ENST00000302085 CMA1P23946 247 aa25.64■■□□□ 1.7
SMAD1-201ENST00000302085 NIM1KQ8IY84 436 aa25.64■■□□□ 1.7
SMAD1-201ENST00000302085 ZBTB12Q9Y330 459 aaPredicted RBP25.64■■□□□ 1.7
SMAD1-201ENST00000302085 SIPA1L1O43166 1804 aa25.64■■□□□ 1.7
SMAD1-201ENST00000302085 NLRP5P59047 1200 aa25.64■■□□□ 1.69
SMAD1-201ENST00000302085 ZSCAN29Q8IWY8 852 aaPredicted RBP25.64■■□□□ 1.69
SMAD1-201ENST00000302085 JMYQ8N9B5 988 aa25.64■■□□□ 1.69
SMAD1-201ENST00000302085 SGIP1Q9BQI5 828 aa25.64■■□□□ 1.69
SMAD1-201ENST00000302085 PPP1R1BQ9UD71 204 aaPredicted RBP25.64■■□□□ 1.69
SMAD1-201ENST00000302085 CLIP2Q9UDT6 1046 aa25.64■■□□□ 1.69
SMAD1-201ENST00000302085 PCDHB6Q9Y5E3 794 aa25.64■■□□□ 1.69
SMAD1-201ENST00000302085 ADAMTS3O15072 1205 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 ENTPD3O75355 529 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 CCDC192P0DO97 292 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 EIF6P56537 245 aaKnown RBP25.63■■□□□ 1.69
SMAD1-201ENST00000302085 FOXP4Q8IVH2 680 aaPredicted RBP25.63■■□□□ 1.69
SMAD1-201ENST00000302085 GPKOWQ92917 476 aaPredicted RBP eCLIP25.63■■□□□ 1.69
SMAD1-201ENST00000302085 CCDC17Q96LX7 622 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 SPZ1Q9BXG8 430 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 CPVLQ9H3G5 476 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 BRMS1Q9HCU9 246 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 SH3GLB2Q9NR46 395 aa25.63■■□□□ 1.69
SMAD1-201ENST00000302085 FAM196BA6NMK8 535 aa25.62■■□□□ 1.69
SMAD1-201ENST00000302085 TTLL1O95922 423 aa25.62■■□□□ 1.69
SMAD1-201ENST00000302085 NOM1Q5C9Z4 860 aaKnown RBP25.62■■□□□ 1.69
SMAD1-201ENST00000302085 SPDYE2BA6NHP3 402 aa25.62■■□□□ 1.69
SMAD1-201ENST00000302085 KINO60870 393 aaKnown RBP25.62■■□□□ 1.69
SMAD1-201ENST00000302085 SPDYE6P0CI01 402 aa25.62■■□□□ 1.69
SMAD1-201ENST00000302085 LRRC47Q8N1G4 583 aaKnown RBP25.62■■□□□ 1.69
SMAD1-201ENST00000302085 MPHOSPH10O00566 681 aaKnown RBP25.61■■□□□ 1.69
SMAD1-201ENST00000302085 PDHBP11177 359 aa25.61■■□□□ 1.69
SMAD1-201ENST00000302085 ATP2B1P20020 1258 aa25.61■■□□□ 1.69
SMAD1-201ENST00000302085 SMARCA1P28370 1054 aa25.61■■□□□ 1.69
SMAD1-201ENST00000302085 TYRO3Q06418 890 aa25.61■■□□□ 1.69
SMAD1-201ENST00000302085 SHC4Q6S5L8 630 aa25.61■■□□□ 1.69
SMAD1-201ENST00000302085 CLIC6Q96NY7 704 aa25.61■■□□□ 1.69
SMAD1-201ENST00000302085 TYW1BQ6NUM6 668 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 TATDN1Q6P1N9 297 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 HDAC9Q9UKV0 1011 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 ATRNL1Q5VV63 1379 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 CTAGE5O15320 804 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 CUTAO60888 179 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 CXCL9Q07325 125 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 DLGAP5Q15398 846 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 WWC2Q6AWC2 1192 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 METTL16Q86W50 562 aaKnown RBP25.6■■□□□ 1.69
SMAD1-201ENST00000302085 MRVI1Q9Y6F6 885 aa25.6■■□□□ 1.69
SMAD1-201ENST00000302085 GREB1LQ9C091 1923 aaPredicted RBP25.6■■□□□ 1.69
SMAD1-201ENST00000302085 SNHG28P0DPA3 235 aa25.59■■□□□ 1.69
SMAD1-201ENST00000302085 PFKFB1P16118 471 aa25.59■■□□□ 1.69
SMAD1-201ENST00000302085 CERKLQ49MI3 558 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms