RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TACC3Q9Y6A5 838 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 SYNJ2BP-COX16A0A087WUM0 186 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 NR1I2O75469 434 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 TTC19Q6DKK2 380 aaPredicted RBP15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 VSIG1Q86XK7 387 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 COX16Q9P0S2 106 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 GYG1P46976 350 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 RPS6KA1Q15418 735 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KRT25Q7Z3Z0 450 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GPBP1Q86WP2 473 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CLIC6Q96NY7 704 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 STK32BQ9NY57 414 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SWAP70Q9UH65 585 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GOLGA8FQ08AF8 430 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GOLGA8DPQ0D2H9 430 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PRR16Q569H4 304 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 RILPQ96NA2 401 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TESK2Q96S53 571 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 THRAP3Q9Y2W1 955 aaKnown RBP15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 INPP5BP32019 993 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GCKRQ14397 625 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 IFIH1Q9BYX4 1025 aaKnown RBP15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 FAM184BQ9ULE4 1060 aa15.02□□□□□ -0.01
CHRFAM7A-201ENST00000299847 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MLKLQ8NB16 471 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TACO1Q9BSH4 297 aaKnown RBP15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 FAM114A2Q9NRY5 505 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ITSN2Q9NZM3 1697 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GBP1P32455 592 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NUP58Q9BVL2 599 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SAT1P21673 171 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 WDR66Q8TBY9 1149 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PARP10Q53GL7 1025 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CCDC62Q6P9F0 684 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CDAN1Q8IWY9 1227 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 LMBRD1Q9NUN5 540 aa15.01□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PFKFB1P16118 471 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 BCAMP50895 628 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DIXDC1Q155Q3 683 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 HS1BP3Q53T59 392 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ARHGEF16Q5VV41 709 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KAZNQ674X7 775 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 EP400NLQ6ZTU2 488 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CTAGE3PQ8IX95 158 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 A0A0D9SFI3 127 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 FAM47CQ5HY64 1035 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GLG1Q92896 1179 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DPH5Q9H2P9 285 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KCNJ18B7U540 433 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 BCRP11274 1271 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SARNPP82979 210 aaKnown RBP15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KCNJ12Q14500 433 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MIER3Q7Z3K6 550 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KCNK3O14649 394 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ITKQ08881 620 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 B4GALNT4Q76KP1 1039 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 LRRC43Q8N309 656 aa15□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MORC3Q14149 939 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DENND2CQ68D51 928 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MMS19Q96T76 1030 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KDM2BQ8NHM5 1336 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 I3L4J1 428 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GIPC1O14908 333 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GAS7O60861 476 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CLNS1AP54105 237 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KRT81Q14533 505 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NXNQ6DKJ4 435 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 IFNB1P01574 187 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PPP1R2P41236 205 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ATP1A2P50993 1020 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 YARSP54577 528 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 IGBP1P78318 339 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CUL4BQ13620 913 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TAOK1Q7L7X3 1001 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CEP120Q8N960 986 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KDRP35968 1356 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TUBB4BP68371 445 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CFAP221Q4G0U5 840 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MIPOL1Q8TD10 442 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TRPC6Q9Y210 931 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 USP17L12C9JPN9 530 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 USP17L21D6R901 530 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ALAS1P13196 640 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 UBXN2AP68543 259 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SEPT6Q14141 434 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TMTC1Q8IUR5 882 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 REXO1Q8N1G1 1221 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 RSAD2Q8WXG1 361 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CARD10Q9BWT7 1032 aa14.99□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PPIP5K2O43314 1243 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PKP1Q13835 747 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SH2D4BQ5SQS7 431 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CACNA2D3Q8IZS8 1091 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CLGNO14967 610 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 C4orf50Q6ZRC1 276 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ZNF654Q8IZM8 581 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DDX41Q9UJV9 622 aaKnown RBP14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MAGED2Q9UNF1 606 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms