RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RASGRP4Q8TDF6 673 aa27.7■■■□□ 2.02
SPTSSA-201ENST00000298130 ADD3Q9UEY8 706 aaKnown RBP27.7■■■□□ 2.02
SPTSSA-201ENST00000298130 ANKRD36CQ5JPF3 1778 aa27.7■■■□□ 2.02
SPTSSA-201ENST00000298130 PRPF3O43395 683 aaKnown RBP27.7■■■□□ 2.02
SPTSSA-201ENST00000298130 IL17AQ16552 155 aa27.7■■■□□ 2.02
SPTSSA-201ENST00000298130 CELF1Q92879 486 aaKnown RBP27.7■■■□□ 2.02
SPTSSA-201ENST00000298130 XDHP47989 1333 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 RRAGBQ5VZM2 374 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 MTRQ99707 1265 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 BAZ2AQ9UIF9 1905 aaKnown RBP27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 ABCA3Q99758 1704 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 CCDC175P0C221 793 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 SLC51AQ86UW1 340 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 PLIN2Q99541 437 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 SRRTQ9BXP5 876 aaKnown RBP27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 PARD6BQ9BYG5 372 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 ADGRG1Q9Y653 693 aa27.69■■■□□ 2.02
SPTSSA-201ENST00000298130 NLRP5P59047 1200 aa27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 SH3RF1Q7Z6J0 888 aa27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 TAF1P21675 1872 aa27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 ANKRD18AQ8IVF6 992 aa27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 EEF2KMTQ96G04 330 aa27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 FAM84BQ96KN1 310 aaPredicted RBP27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 AK7Q96M32 723 aa27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 TAB2Q9NYJ8 693 aa27.68■■■□□ 2.02
SPTSSA-201ENST00000298130 KCNQ2O43526 872 aa27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 GPKOWQ92917 476 aaPredicted RBP eCLIP27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 LRP5O75197 1615 aa27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 GYPCP04921 128 aa27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 ZNF569Q5MCW4 686 aa27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 TMTC3Q6ZXV5 915 aa27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 CDC5LQ99459 802 aaKnown RBP27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 TIAM2Q8IVF5 1701 aa27.67■■■□□ 2.02
SPTSSA-201ENST00000298130 GYS2P54840 703 aa27.66■■■□□ 2.02
SPTSSA-201ENST00000298130 PARP10Q53GL7 1025 aa27.66■■■□□ 2.02
SPTSSA-201ENST00000298130 GNL3LQ9NVN8 582 aaKnown RBP27.66■■■□□ 2.02
SPTSSA-201ENST00000298130 ANAPC4Q9UJX5 808 aa27.66■■■□□ 2.02
SPTSSA-201ENST00000298130 GDAQ9Y2T3 454 aa27.66■■■□□ 2.02
SPTSSA-201ENST00000298130 DISP2A7MBM2 1401 aa27.66■■■□□ 2.02
SPTSSA-201ENST00000298130 DOCK2Q92608 1830 aa27.66■■■□□ 2.02
SPTSSA-201ENST00000298130 TBC1D8O95759 1140 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 PRDX5P30044 214 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 CC2D1AQ6P1N0 951 aaPredicted RBP27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 TNFRSF25Q93038 417 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 MINPP1Q9UNW1 487 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 GTF2E1P29083 439 aaPredicted RBP27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 CAVIN4Q5BKX8 364 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 CDKAL1Q5VV42 579 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 CNTNAP5Q8WYK1 1306 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 BRMS1Q9HCU9 246 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 N4BP3O15049 544 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 KRT31Q15323 416 aa27.65■■■□□ 2.02
SPTSSA-201ENST00000298130 GOLGA6L9A6NEM1 432 aa27.64■■■□□ 2.02
SPTSSA-201ENST00000298130 MFAP3LO75121 409 aa27.64■■■□□ 2.02
SPTSSA-201ENST00000298130 CTCFLQ8NI51 663 aaPredicted RBP27.64■■■□□ 2.02
SPTSSA-201ENST00000298130 CICQ96RK0 1608 aaPredicted RBP27.64■■■□□ 2.02
SPTSSA-201ENST00000298130 PP2D1A8MPX8 630 aa27.64■■■□□ 2.01
SPTSSA-201ENST00000298130 MECOMQ03112 1051 aa27.64■■■□□ 2.01
SPTSSA-201ENST00000298130 ZNF804BA4D1E1 1349 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 MYH6P13533 1939 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 DDB1Q16531 1140 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 RSRC2Q7L4I2 434 aaKnown RBP27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 FERMT2Q96AC1 680 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 TRIM49BA6NDI0 452 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 PES1O00541 588 aaKnown RBP27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 PBX1P40424 430 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 GSDMAQ96QA5 445 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 PANX2Q96RD6 677 aa27.63■■■□□ 2.01
SPTSSA-201ENST00000298130 ATP2C1P98194 919 aaPredicted RBP27.62■■■□□ 2.01
SPTSSA-201ENST00000298130 TFR2Q9UP52 801 aa27.62■■■□□ 2.01
SPTSSA-201ENST00000298130 RCAN1P53805 252 aa27.62■■■□□ 2.01
SPTSSA-201ENST00000298130 ERVK-24P63145 666 aa27.62■■■□□ 2.01
SPTSSA-201ENST00000298130 FILIP1LQ4L180 1135 aa27.62■■■□□ 2.01
SPTSSA-201ENST00000298130 MARCH10Q8NA82 808 aaPredicted RBP27.62■■■□□ 2.01
SPTSSA-201ENST00000298130 BCORQ6W2J9 1755 aa27.62■■■□□ 2.01
SPTSSA-201ENST00000298130 E2F4Q16254 413 aa27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 NUP88Q99567 741 aaPredicted RBP27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 MTA3Q9BTC8 594 aa27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 FAM205AQ6ZU69 1335 aa27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 TSPY2A6NKD2 308 aa27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 KIF4BQ2VIQ3 1234 aa27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 SLC35F6Q8N357 371 aa27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 GPR161Q8N6U8 529 aaKnown RBP27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 NSUN4Q96CB9 384 aaKnown RBP27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 DCP1AQ9NPI6 582 aaPredicted RBP27.61■■■□□ 2.01
SPTSSA-201ENST00000298130 SCG2P13521 617 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 ST5P78524 1137 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 STAG2Q8N3U4 1231 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 RBM28Q9NW13 759 aaKnown RBP27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 ARAP2Q8WZ64 1704 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 BCL9LQ86UU0 1499 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 KIF5CO60282 957 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 USP17L8P0C7I0 530 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 IQUBQ8NA54 791 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 NELFBQ8WX92 580 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 GOLGA1Q92805 767 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 SLF1Q9BQI6 1058 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 OAS2P29728 719 aaKnown RBP27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 PDXDC2PQ6P474 469 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 NEK11Q8NG66 645 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms