RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 TRIM17Q9Y577 477 aa27.76■■■□□ 2.03
GBX1-201ENST00000297537 ZNF213O14771 459 aa27.75■■■□□ 2.03
GBX1-201ENST00000297537 PCP11498 1178 aaKnown RBP27.75■■■□□ 2.03
GBX1-201ENST00000297537 HERVK_113P62684 666 aa27.75■■■□□ 2.03
GBX1-201ENST00000297537 FAM110CQ1W6H9 321 aa27.75■■■□□ 2.03
GBX1-201ENST00000297537 AKNAD1Q5T1N1 836 aa27.75■■■□□ 2.03
GBX1-201ENST00000297537 ANKRD13CQ8N6S4 541 aa27.75■■■□□ 2.03
GBX1-201ENST00000297537 RPAP3Q9H6T3 665 aaPredicted RBP27.75■■■□□ 2.03
GBX1-201ENST00000297537 ATP2B2Q01814 1243 aa27.74■■■□□ 2.03
GBX1-201ENST00000297537 TBC1D10CQ8IV04 446 aa27.74■■■□□ 2.03
GBX1-201ENST00000297537 IL17RBQ9NRM6 502 aa27.74■■■□□ 2.03
GBX1-201ENST00000297537 CTNNA3Q9UI47 895 aa27.74■■■□□ 2.03
GBX1-201ENST00000297537 HTTP42858 3142 aa27.74■■■□□ 2.03
GBX1-201ENST00000297537 NOVP48745 357 aa27.73■■■□□ 2.03
GBX1-201ENST00000297537 PTH1RQ03431 593 aa27.73■■■□□ 2.03
GBX1-201ENST00000297537 KIF22Q14807 665 aa27.73■■■□□ 2.03
GBX1-201ENST00000297537 ARHGEF6Q15052 776 aa27.73■■■□□ 2.03
GBX1-201ENST00000297537 MORF4L1Q9UBU8 362 aa27.73■■■□□ 2.03
GBX1-201ENST00000297537 CLIP2Q9UDT6 1046 aa27.73■■■□□ 2.03
GBX1-201ENST00000297537 SYNPO2Q9UMS6 1093 aa27.73■■■□□ 2.03
GBX1-201ENST00000297537 TSPY2A6NKD2 308 aa27.72■■■□□ 2.03
GBX1-201ENST00000297537 RANBP6O60518 1105 aaKnown RBP27.72■■■□□ 2.03
GBX1-201ENST00000297537 TTLL1O95922 423 aa27.72■■■□□ 2.03
GBX1-201ENST00000297537 GNRH1P01148 92 aa27.72■■■□□ 2.03
GBX1-201ENST00000297537 LBX2Q6XYB7 198 aa27.72■■■□□ 2.03
GBX1-201ENST00000297537 MFSD6Q6ZSS7 791 aa27.72■■■□□ 2.03
GBX1-201ENST00000297537 SPICE1Q8N0Z3 855 aa27.72■■■□□ 2.03
GBX1-201ENST00000297537 RBPJLQ9UBG7 517 aa27.72■■■□□ 2.03
GBX1-201ENST00000297537 PSMC4P43686 418 aa27.71■■■□□ 2.03
GBX1-201ENST00000297537 FBXO46Q6PJ61 603 aaPredicted RBP27.71■■■□□ 2.03
GBX1-201ENST00000297537 NKX2-3Q8TAU0 364 aa27.71■■■□□ 2.03
GBX1-201ENST00000297537 GTF3C2Q8WUA4 911 aaPredicted RBP27.71■■■□□ 2.03
GBX1-201ENST00000297537 ABHD8Q96I13 439 aa27.71■■■□□ 2.03
GBX1-201ENST00000297537 TRIM47Q96LD4 638 aa27.71■■■□□ 2.03
GBX1-201ENST00000297537 RNF41Q9H4P4 317 aaPredicted RBP27.71■■■□□ 2.03
GBX1-201ENST00000297537 GOPCQ9HD26 462 aa27.71■■■□□ 2.03
GBX1-201ENST00000297537 TXNRD2Q9NNW7 524 aa27.71■■■□□ 2.03
GBX1-201ENST00000297537 PTPN22Q9Y2R2 807 aa27.71■■■□□ 2.03
GBX1-201ENST00000297537 WDR46O15213 610 aaKnown RBP27.7■■■□□ 2.02
GBX1-201ENST00000297537 IMMTQ16891 758 aaKnown RBP27.7■■■□□ 2.02
GBX1-201ENST00000297537 TCP11L1Q9NUJ3 509 aa27.7■■■□□ 2.02
GBX1-201ENST00000297537 F5H6K3 240 aa27.69■■■□□ 2.02
GBX1-201ENST00000297537 NMT2O60551 498 aa27.69■■■□□ 2.02
GBX1-201ENST00000297537 KLRC3Q07444 240 aa27.69■■■□□ 2.02
GBX1-201ENST00000297537 COG2Q14746 738 aa27.69■■■□□ 2.02
GBX1-201ENST00000297537 MAP4K1Q92918 833 aa27.69■■■□□ 2.02
GBX1-201ENST00000297537 ESYT1Q9BSJ8 1104 aa27.69■■■□□ 2.02
GBX1-201ENST00000297537 ZSWIM8A7E2V4 1837 aa27.69■■■□□ 2.02
GBX1-201ENST00000297537 SPDYE16A6NNV3 312 aaPredicted RBP27.68■■■□□ 2.02
GBX1-201ENST00000297537 PEX10O60683 326 aa27.68■■■□□ 2.02
GBX1-201ENST00000297537 NT5C2P49902 561 aa27.68■■■□□ 2.02
GBX1-201ENST00000297537 Q3C1V9 767 aa27.68■■■□□ 2.02
GBX1-201ENST00000297537 RRP12Q5JTH9 1297 aaKnown RBP27.68■■■□□ 2.02
GBX1-201ENST00000297537 PPP4R3BQ5MIZ7 849 aa27.68■■■□□ 2.02
GBX1-201ENST00000297537 TOMM22Q9NS69 142 aa27.68■■■□□ 2.02
GBX1-201ENST00000297537 HOXC10Q9NYD6 342 aa27.68■■■□□ 2.02
GBX1-201ENST00000297537 NEDD4P46934 1319 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 LAMA4Q16363 1823 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 CNMDO75829 334 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 FCGRTP55899 365 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 GMCL1P1Q8NEA9 526 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 GPRC5AQ8NFJ5 357 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 TANGO6Q9C0B7 1094 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 RABGAP1Q9Y3P9 1069 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 RLFQ13129 1914 aa27.67■■■□□ 2.02
GBX1-201ENST00000297537 FMNL1O95466 1100 aaPredicted RBP27.66■■■□□ 2.02
GBX1-201ENST00000297537 NDUFB10O96000 172 aa27.66■■■□□ 2.02
GBX1-201ENST00000297537 SRRDQ9UH36 339 aa27.66■■■□□ 2.02
GBX1-201ENST00000297537 HPS5Q9UPZ3 1129 aa27.66■■■□□ 2.02
GBX1-201ENST00000297537 U3KPZ7 1027 aaPredicted RBP27.66■■■□□ 2.02
GBX1-201ENST00000297537 ECM2O94769 699 aaPredicted RBP27.65■■■□□ 2.02
GBX1-201ENST00000297537 DSG3P32926 999 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 PRMT2P55345 433 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 ERVK-9P63128 1117 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 ERVK-24P63145 666 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 ESR2Q92731 530 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 LSG1Q9H089 658 aaKnown RBP27.65■■■□□ 2.02
GBX1-201ENST00000297537 ADAMTS5Q9UNA0 930 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 CENPFP49454 3210 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 MYPNQ86TC9 1320 aa27.65■■■□□ 2.02
GBX1-201ENST00000297537 CYP21A2P08686 494 aa27.64■■■□□ 2.02
GBX1-201ENST00000297537 HOXD10P28358 340 aa27.64■■■□□ 2.02
GBX1-201ENST00000297537 FAM83BQ5T0W9 1011 aa27.64■■■□□ 2.02
GBX1-201ENST00000297537 LRRC47Q8N1G4 583 aaKnown RBP27.64■■■□□ 2.02
GBX1-201ENST00000297537 BTBD7Q9P203 1132 aa27.64■■■□□ 2.02
GBX1-201ENST00000297537 STX8Q9UNK0 236 aa27.64■■■□□ 2.02
GBX1-201ENST00000297537 MYH4Q9Y623 1939 aa27.64■■■□□ 2.02
GBX1-201ENST00000297537 CDC45O75419 566 aa27.63■■■□□ 2.01
GBX1-201ENST00000297537 FLOT1O75955 427 aa27.63■■■□□ 2.01
GBX1-201ENST00000297537 PAGR1Q9BTK6 254 aa27.63■■■□□ 2.01
GBX1-201ENST00000297537 MGAMO43451 1857 aa27.62■■■□□ 2.01
GBX1-201ENST00000297537 RAD21O60216 631 aa27.62■■■□□ 2.01
GBX1-201ENST00000297537 RCSD1Q6JBY9 416 aa27.62■■■□□ 2.01
GBX1-201ENST00000297537 TTC14Q96N46 770 aa27.62■■■□□ 2.01
GBX1-201ENST00000297537 NUP88Q99567 741 aaPredicted RBP27.62■■■□□ 2.01
GBX1-201ENST00000297537 FBXO28Q9NVF7 368 aa27.62■■■□□ 2.01
GBX1-201ENST00000297537 PTCH2Q9Y6C5 1203 aa27.62■■■□□ 2.01
GBX1-201ENST00000297537 TNPO2O14787 897 aaKnown RBP27.61■■■□□ 2.01
GBX1-201ENST00000297537 KDM4AO75164 1064 aa27.61■■■□□ 2.01
GBX1-201ENST00000297537 IFFO2Q5TF58 517 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms