RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 POSTNQ15063 836 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 PTPN14Q15678 1187 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 NPY5RQ15761 445 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 LONRF3Q496Y0 759 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 CEP135Q66GS9 1140 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 CTR9Q6PD62 1173 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 ADGRD1Q6QNK2 874 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 DGKHQ86XP1 1220 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 RAB11FIP4Q86YS3 637 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 VSTM4Q8IW00 320 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 FNBP4Q8N3X1 1017 aaPredicted RBP7.55□□□□□ -1.2
DEFB1-201ENST00000297439 PDCL2Q8N4E4 241 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 MPNDQ8N594 471 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 ZNF384Q8TF68 577 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 NLRP3Q96P20 1036 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 MYL10Q9BUA6 226 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 CCDC94Q9BW85 323 aaPredicted RBP7.55□□□□□ -1.2
DEFB1-201ENST00000297439 L2HGDHQ9H9P8 463 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 BRMS1Q9HCU9 246 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 IFNKQ9P0W0 207 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
DEFB1-201ENST00000297439 LEMD3Q9Y2U8 911 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 PCDHA5Q9Y5H7 936 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 BTAF1O14981 1849 aa7.55□□□□□ -1.2
DEFB1-201ENST00000297439 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 MYH13Q9UKX3 1938 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 TNRC6CQ9HCJ0 1690 aaKnown RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 GOLGA6L9A6NEM1 432 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 PPFIA3O75145 1194 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 SMC2O95347 1197 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 SLFN14P0C7P3 912 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 HMGB2P26583 209 aaKnown RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 CALML3P27482 149 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 HIBADHP31937 336 aaKnown RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 KIF5BP33176 963 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 GYG1P46976 350 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 PPP4CP60510 307 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 ATP2C1P98194 919 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 TBX2Q13207 712 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 TPD52L1Q16890 204 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 IFIT1BQ5T764 474 aaKnown RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 ARL6IP4Q66PJ3 421 aaKnown RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 GALNT17Q6IS24 598 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 ARMCX5Q6P1M9 558 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 TPTE2Q6XPS3 522 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 FILIP1Q7Z7B0 1213 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 NUTM2AQ8IVF1 878 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 FOXP4Q8IVH2 680 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 MIGA1Q8NAN2 632 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 DAGLBQ8NCG7 672 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 CTCFLQ8NI51 663 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 KIF18AQ8NI77 898 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 WDR66Q8TBY9 1149 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 ACSBG1Q96GR2 724 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 C16orf45Q96MC5 204 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 GSDMAQ96QA5 445 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 FEZ1Q99689 392 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 DCP1AQ9NPI6 582 aaPredicted RBP7.54□□□□□ -1.2
DEFB1-201ENST00000297439 TCP11L1Q9NUJ3 509 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 ABCF2Q9UG63 623 aa7.54□□□□□ -1.2
DEFB1-201ENST00000297439 PHLPP2Q6ZVD8 1323 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 DDX60LQ5H9U9 1706 aaKnown RBP7.53□□□□□ -1.2
DEFB1-201ENST00000297439 TAF1LQ8IZX4 1826 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 TOM1O60784 492 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 MYL1P05976 194 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 BMP6P22004 513 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 SMARCA1P28370 1054 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 TM4SF1P30408 202 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 GNAQP50148 359 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 PLCD1P51178 756 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 UBASH3AP57075 661 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 GSTO1P78417 241 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 MECOMQ03112 1051 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 PDE4BQ07343 736 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 ORC2Q13416 577 aaPredicted RBP7.53□□□□□ -1.2
DEFB1-201ENST00000297439 PNOCQ13519 176 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 PFKFB3Q16875 520 aaPredicted RBP7.53□□□□□ -1.2
DEFB1-201ENST00000297439 RRP12Q5JTH9 1297 aaKnown RBP7.53□□□□□ -1.2
DEFB1-201ENST00000297439 TBC1D9BQ66K14 1250 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 E4F1Q66K89 784 aaPredicted RBP7.53□□□□□ -1.2
DEFB1-201ENST00000297439 CERKQ8TCT0 537 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 SDR42E1Q8WUS8 393 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 CELF1Q92879 486 aaKnown RBP7.53□□□□□ -1.2
DEFB1-201ENST00000297439 SMARCE1Q969G3 411 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 SHISA4Q96DD7 197 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 ERO1AQ96HE7 468 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 CLIC6Q96NY7 704 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 GTPBP4Q9BZE4 634 aaKnown RBP7.53□□□□□ -1.2
DEFB1-201ENST00000297439 INCENPQ9NQS7 918 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 MAN1B1Q9UKM7 699 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 KCNJ14Q9UNX9 436 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 PCDHB6Q9Y5E3 794 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 CCDC88AQ3V6T2 1871 aa7.53□□□□□ -1.2
DEFB1-201ENST00000297439 SPATA31A6Q5VVP1 1343 aa7.52□□□□□ -1.2
DEFB1-201ENST00000297439 MINDY4BA8MYZ0 360 aa7.52□□□□□ -1.21
DEFB1-201ENST00000297439 USP17L12C9JPN9 530 aa7.52□□□□□ -1.21
DEFB1-201ENST00000297439 USP17L21D6R901 530 aa7.52□□□□□ -1.21
DEFB1-201ENST00000297439 TK2O00142 265 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms