RNA–Protein interactions for RNA: ENST00000296812.6

FBXO4-202, Transcript of F-box protein 4, humanhuman

TSL 1 (best) BASIC

Gene FBXO4, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-202ENST00000296812 FOXD4L6Q3SYB3 417 aaPredicted RBP19.59■□□□□ 0.73
FBXO4-202ENST00000296812 FOXD4L3Q6VB84 417 aaPredicted RBP19.59■□□□□ 0.73
FBXO4-202ENST00000296812 DCPSQ96C86 337 aaKnown RBP19.59■□□□□ 0.73
FBXO4-202ENST00000296812 CHMP4CQ96CF2 233 aa19.59■□□□□ 0.73
FBXO4-202ENST00000296812 FZD1Q9UP38 647 aa19.59■□□□□ 0.73
FBXO4-202ENST00000296812 EAPPQ56P03 285 aaPredicted RBP19.59■□□□□ 0.73
FBXO4-202ENST00000296812 CMTR1Q8N1G2 835 aaKnown RBP19.59■□□□□ 0.73
FBXO4-202ENST00000296812 ZBTB21Q9ULJ3 1066 aa19.59■□□□□ 0.73
FBXO4-202ENST00000296812 MTMR7Q9Y216 660 aa19.59■□□□□ 0.73
FBXO4-202ENST00000296812 CPLX1O14810 134 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 DHX16O60231 1041 aaKnown RBP19.58■□□□□ 0.72
FBXO4-202ENST00000296812 PLEKHA8P1O95397 391 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 POTEIP0CG38 1075 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 POTEJP0CG39 1038 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 CALM1P0DP23 149 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 CALM2P0DP24 149 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 CALM3P0DP25 149 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 EEF2P13639 858 aaKnown RBP19.58■□□□□ 0.72
FBXO4-202ENST00000296812 ZC3H15Q8WU90 426 aaKnown RBP19.58■□□□□ 0.72
FBXO4-202ENST00000296812 PHKBQ93100 1093 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 GZF1Q9H116 711 aaPredicted RBP19.58■□□□□ 0.72
FBXO4-202ENST00000296812 KANSL2Q9H9L4 492 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 CABP5Q9NP86 173 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 NYAP2Q9P242 653 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 PTPRFP10586 1907 aa19.58■□□□□ 0.72
FBXO4-202ENST00000296812 PRPF40AO75400 957 aaKnown RBP19.57■□□□□ 0.72
FBXO4-202ENST00000296812 ATP2B2Q01814 1243 aa19.57■□□□□ 0.72
FBXO4-202ENST00000296812 ICA1Q05084 483 aa19.57■□□□□ 0.72
FBXO4-202ENST00000296812 GRM4Q14833 912 aa19.57■□□□□ 0.72
FBXO4-202ENST00000296812 CDC37L1Q7L3B6 337 aa19.57■□□□□ 0.72
FBXO4-202ENST00000296812 KRT26Q7Z3Y9 468 aa19.57■□□□□ 0.72
FBXO4-202ENST00000296812 STAG2Q8N3U4 1231 aa19.57■□□□□ 0.72
FBXO4-202ENST00000296812 UBE2Q2LH0YL09 131 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 IFNAR1P17181 557 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 FUT2Q10981 343 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 NBPF11Q86T75 865 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 SULF1Q8IWU6 871 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 MAD2L2Q9UI95 211 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 PDIA4P13667 645 aaKnown RBP19.56■□□□□ 0.72
FBXO4-202ENST00000296812 INPP5BP32019 993 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 HMGN5P82970 282 aaKnown RBP19.56■□□□□ 0.72
FBXO4-202ENST00000296812 DCAF15Q66K64 600 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 CCDC84Q86UT8 332 aaPredicted RBP19.56■□□□□ 0.72
FBXO4-202ENST00000296812 CCDC82Q8N4S0 544 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 CTCFLQ8NI51 663 aaPredicted RBP19.56■□□□□ 0.72
FBXO4-202ENST00000296812 MKL1Q969V6 931 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 MAP3K14Q99558 947 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 ZNF341Q9BYN7 854 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 RRAGCQ9HB90 399 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 ZNF112Q9UJU3 913 aa19.56■□□□□ 0.72
FBXO4-202ENST00000296812 CCDC196A0A1B0GTZ2 297 aa19.55■□□□□ 0.72
FBXO4-202ENST00000296812 A0A1W2PRG0 241 aa19.55■□□□□ 0.72
FBXO4-202ENST00000296812 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
FBXO4-202ENST00000296812 USP17L5A8MUK1 530 aa19.55■□□□□ 0.72
FBXO4-202ENST00000296812 PPP2R5BQ15173 497 aa19.55■□□□□ 0.72
FBXO4-202ENST00000296812 TMTC3Q6ZXV5 915 aa19.55■□□□□ 0.72
FBXO4-202ENST00000296812 USP48Q86UV5 1035 aa19.55■□□□□ 0.72
FBXO4-202ENST00000296812 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
FBXO4-202ENST00000296812 ORC3Q9UBD5 711 aaPredicted RBP19.55■□□□□ 0.72
FBXO4-202ENST00000296812 DDX49Q9Y6V7 483 aaKnown RBP19.55■□□□□ 0.72
FBXO4-202ENST00000296812 PDHBP11177 359 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 SLC35G1Q2M3R5 365 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 KLHL40Q2TBA0 621 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 USP17L2Q6R6M4 530 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 PNMA8AQ86V59 439 aaPredicted RBP19.54■□□□□ 0.72
FBXO4-202ENST00000296812 SRBD1Q8N5C6 995 aaKnown RBP19.54■□□□□ 0.72
FBXO4-202ENST00000296812 FAM184AQ8NB25 1140 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 GLIS2Q9BZE0 524 aaPredicted RBP19.54■□□□□ 0.72
FBXO4-202ENST00000296812 ATP6V1DQ9Y5K8 247 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 SMCHD1A6NHR9 2005 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 PARP14Q460N5 1801 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 CNTNAP5Q8WYK1 1306 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 PALM3A6NDB9 673 aaPredicted RBP19.54■□□□□ 0.72
FBXO4-202ENST00000296812 CDKL5O76039 1030 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 FMNL1O95466 1100 aaPredicted RBP19.54■□□□□ 0.72
FBXO4-202ENST00000296812 GOLGA8HP0CJ92 632 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 SNHG28P0DPA3 235 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 PPP4R3BQ5MIZ7 849 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 CPLX2Q6PUV4 134 aaKnown RBP19.54■□□□□ 0.72
FBXO4-202ENST00000296812 ACER1Q8TDN7 264 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 HOOK2Q96ED9 719 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 AIFM3Q96NN9 605 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 SLC26A6Q9BXS9 759 aa19.54■□□□□ 0.72
FBXO4-202ENST00000296812 CTNND1O60716 968 aaKnown RBP19.53■□□□□ 0.72
FBXO4-202ENST00000296812 ASNSP08243 561 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 ECE1P42892 770 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 FOSBP53539 338 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 PRKG1Q13976 671 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 SUPT20HL1Q3ZLR7 823 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 KLRG1Q96E93 195 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 GDPD2Q9HCC8 539 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 CNPY2Q9Y2B0 182 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 TRPM7Q96QT4 1865 aa19.53■□□□□ 0.72
FBXO4-202ENST00000296812 STK36Q9NRP7 1315 aa19.52■□□□□ 0.72
FBXO4-202ENST00000296812 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
FBXO4-202ENST00000296812 VEGFAP15692 232 aaPredicted RBP19.52■□□□□ 0.72
FBXO4-202ENST00000296812 KIF5BP33176 963 aa19.52■□□□□ 0.72
FBXO4-202ENST00000296812 SSRP1Q08945 709 aaKnown RBP19.52■□□□□ 0.72
FBXO4-202ENST00000296812 FERMT3Q86UX7 667 aa19.52■□□□□ 0.72
FBXO4-202ENST00000296812 ZKSCAN4Q969J2 545 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms