RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 KCNB2Q92953 911 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 TANGO6Q9C0B7 1094 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 PDP2Q9P2J9 529 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 ZNF180Q9UJW8 692 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
SNIP1-201ENST00000296215 ATP6V1G2O95670 118 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 CLCN2P51788 898 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-201ENST00000296215 KCNG4Q8TDN1 519 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 SLF1Q9BQI6 1058 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 TXLNGQ9NUQ3 528 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 NUP155O75694 1391 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 GUCY2DQ02846 1103 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-201ENST00000296215 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-201ENST00000296215 CCDC62Q6P9F0 684 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 FUKQ8N0W3 1084 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 NAT1P18440 290 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 LSP1P33241 339 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 HNRNPMP52272 730 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNIP1-201ENST00000296215 NUDCD1Q96RS6 583 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 NDNQ99608 321 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 MOV10L1Q9BXT6 1211 aaKnown RBP12.94□□□□□ -0.34
SNIP1-201ENST00000296215 ERBB3P21860 1342 aa12.94□□□□□ -0.34
SNIP1-201ENST00000296215 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 LMBRD2Q68DH5 695 aaPredicted RBP12.93□□□□□ -0.34
SNIP1-201ENST00000296215 TTC6Q86TZ1 520 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 CFAP61Q8NHU2 1237 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 INTS9Q9NV88 658 aaKnown RBP12.93□□□□□ -0.34
SNIP1-201ENST00000296215 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 SFI1A8K8P3 1242 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 PRC1O43663 620 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 ECE1P42892 770 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 IFNAR2P48551 515 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 MAML3Q96JK9 1138 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 CCDC42Q96M95 316 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 TMCO1Q9UM00 188 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 A0A1B0GVL5 298 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 SLC26A4O43511 780 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 GNAI2P04899 355 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 ADARP55265 1226 aaKnown RBP12.93□□□□□ -0.34
SNIP1-201ENST00000296215 P3H1Q32P28 736 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 CROCCP2Q86T23 111 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 ELAC2Q9BQ52 826 aaKnown RBP12.93□□□□□ -0.34
SNIP1-201ENST00000296215 OSBPL10Q9BXB5 764 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
SNIP1-201ENST00000296215 EURLQ9NYK6 297 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 KIF21BO75037 1637 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 TUBA1BP68363 451 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 IRX4P78413 519 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 PLEKHM2Q8IWE5 1019 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 MGARPQ8TDB4 240 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 ZBED2Q9BTP6 218 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 MKL2Q9ULH7 1088 aa12.93□□□□□ -0.34
SNIP1-201ENST00000296215 KANK1Q14678 1352 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 STAMBPO95630 424 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 GNAI3P08754 354 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 C11orf57Q6ZUT1 292 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-201ENST00000296215 FLCNQ8NFG4 579 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 BRF1Q92994 677 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 PSMB7Q99436 277 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 L3MBTL1Q9Y468 752 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 TRIM64CA6NLI5 447 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 ARL1P40616 181 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-201ENST00000296215 CCZ1BP86790 482 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 CCZ1P86791 482 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-201ENST00000296215 SPAG1Q07617 926 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 RGS16O15492 202 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-201ENST00000296215 MAN1A2O60476 641 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 PRR16Q569H4 304 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 ANO5Q75V66 913 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 C16orf71Q8IYS4 520 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-201ENST00000296215 FANCLQ9NW38 375 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 SPG7Q9UQ90 795 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 TRIM37O94972 964 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-201ENST00000296215 MYL6BP14649 208 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 GOLGA8FQ08AF8 430 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 GOLGA8DPQ0D2H9 430 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 EMBQ6PCB8 327 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 OSBPL5Q9H0X9 879 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-201ENST00000296215 SYNCQ9H7C4 482 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 TBC1D23Q9NUY8 699 aa12.92□□□□□ -0.34
SNIP1-201ENST00000296215 FAM107AO95990 144 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 CYP11B2P19099 503 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 NLRP12P59046 1061 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 NCAPH2Q6IBW4 605 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 DMAP1Q9NPF5 467 aaPredicted RBP12.91□□□□□ -0.34
SNIP1-201ENST00000296215 GIMAP4Q9NUV9 329 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 ATP5DP30049 168 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 FLT3P36888 993 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 SEC24CP53992 1094 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 TNIP1Q15025 636 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 MIS18BP1Q6P0N0 1132 aa12.91□□□□□ -0.34
SNIP1-201ENST00000296215 ZNF554Q86TJ5 538 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms