RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 MCM7P33993 719 aa15.05■□□□□ 0
KCNIP3-201ENST00000295225 NUTM2AQ8IVF1 878 aaPredicted RBP15.05■□□□□ 0
KCNIP3-201ENST00000295225 ENAHQ8N8S7 591 aaPredicted RBP15.05■□□□□ 0
KCNIP3-201ENST00000295225 CCDC12Q8WUD4 166 aaPredicted RBP15.05■□□□□ 0
KCNIP3-201ENST00000295225 VPS16Q9H269 839 aa15.05■□□□□ 0
KCNIP3-201ENST00000295225 ACTN4O43707 911 aaKnown RBP15.05■□□□□ -0
KCNIP3-201ENST00000295225 ZRSR2Q15696 482 aaKnown RBP15.05■□□□□ -0
KCNIP3-201ENST00000295225 RAD9BQ6WBX8 426 aa15.05■□□□□ -0
KCNIP3-201ENST00000295225 ACRBPQ8NEB7 543 aa15.05■□□□□ -0
KCNIP3-201ENST00000295225 MYH7P12883 1935 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 PNMA6AP0CW24 399 aaPredicted RBP15.04■□□□□ -0
KCNIP3-201ENST00000295225 PLA2G4AP47712 749 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 CTR9Q6PD62 1173 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.04■□□□□ -0
KCNIP3-201ENST00000295225 AATFQ9NY61 560 aaKnown RBP eCLIP15.04■□□□□ -0
KCNIP3-201ENST00000295225 TOGARAM1Q9Y4F4 1720 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 PP2D1A8MPX8 630 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 UQCRFS1P1P0C7P4 283 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 CASQ1P31415 396 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 TNNT3P45378 269 aaPredicted RBP15.04■□□□□ -0
KCNIP3-201ENST00000295225 AKAP17AQ02040 695 aaKnown RBP15.04■□□□□ -0
KCNIP3-201ENST00000295225 PKN1Q16512 942 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 RBM26Q5T8P6 1007 aaKnown RBP15.04■□□□□ -0
KCNIP3-201ENST00000295225 SPECC1LQ69YQ0 1117 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 PIK3AP1Q6ZUJ8 805 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 ZNF384Q8TF68 577 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 CTNND2Q9UQB3 1225 aa15.04■□□□□ -0
KCNIP3-201ENST00000295225 USP17L12C9JPN9 530 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 USP17L21D6R901 530 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 H2AFXP16104 143 aaPredicted RBP15.03■□□□□ -0
KCNIP3-201ENST00000295225 LIFRP42702 1097 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 CRKLP46109 303 aaKnown RBP15.03■□□□□ -0
KCNIP3-201ENST00000295225 SART3Q15020 963 aaKnown RBP15.03■□□□□ -0
KCNIP3-201ENST00000295225 SYCP1Q15431 976 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 GPKOWQ92917 476 aaPredicted RBP eCLIP15.03■□□□□ -0
KCNIP3-201ENST00000295225 CDC5LQ99459 802 aaKnown RBP15.03■□□□□ -0
KCNIP3-201ENST00000295225 PARP4Q9UKK3 1724 aaKnown RBP15.03■□□□□ -0
KCNIP3-201ENST00000295225 TNS2Q63HR2 1409 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 CASP14P31944 242 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 ST5P78524 1137 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 NEK11Q8NG66 645 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 NACAP1Q9BZK3 213 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 TRIM10Q9UDY6 481 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 MYH2Q9UKX2 1941 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 KDM4FA0A1W2PPD8 638 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 CBFA2T2O43439 604 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 ITPK1Q13572 414 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 MORC3Q14149 939 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 ZNF34Q8IZ26 560 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 UIMC1Q96RL1 719 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 KRT23Q9C075 422 aa15.03■□□□□ -0
KCNIP3-201ENST00000295225 CDHR2Q9BYE9 1310 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 ABCC12Q96J65 1359 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 MAGEB6P1A0A0J9YX57 407 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 DEXIO95424 95 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 IGHMBP2P38935 993 aaKnown RBP15.02■□□□□ -0
KCNIP3-201ENST00000295225 FXR1P51114 621 aaKnown RBP eCLIP15.02■□□□□ -0
KCNIP3-201ENST00000295225 FOXD4Q12950 439 aaPredicted RBP15.02■□□□□ -0
KCNIP3-201ENST00000295225 PTGDRQ13258 359 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 FAM182BQ5T319 152 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 IFIT1BQ5T764 474 aaKnown RBP15.02■□□□□ -0
KCNIP3-201ENST00000295225 PTF1AQ7RTS3 328 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 IGSF22Q8N9C0 903 aa15.02■□□□□ -0
KCNIP3-201ENST00000295225 TRIM49BA6NDI0 452 aa15.02□□□□□ -0.01
KCNIP3-201ENST00000295225 TADA3O75528 432 aa15.02□□□□□ -0.01
KCNIP3-201ENST00000295225 C1QTNF12Q5T7M4 302 aa15.02□□□□□ -0.01
KCNIP3-201ENST00000295225 PROCA1Q8NCQ7 364 aaPredicted RBP15.02□□□□□ -0.01
KCNIP3-201ENST00000295225 PAGE5Q96GU1 130 aa15.02□□□□□ -0.01
KCNIP3-201ENST00000295225 RPS6KL1Q9Y6S9 549 aa15.02□□□□□ -0.01
KCNIP3-201ENST00000295225 BAZ2AQ9UIF9 1905 aaKnown RBP15.02□□□□□ -0.01
KCNIP3-201ENST00000295225 ECM29Q5VYK3 1845 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 COQ9O75208 318 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 ZNF18P17022 549 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 PPP2R3AQ06190 1150 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 CUL4BQ13620 913 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 DHX8Q14562 1220 aaKnown RBP15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 ERFEQ4G0M1 354 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 INTS5Q6P9B9 1019 aaKnown RBP15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 GPR101Q96P66 508 aaPredicted RBP15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 TAB2Q9NYJ8 693 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 PCNTO95613 3336 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 TRIM75PA6NK02 468 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 RILPL1Q5EBL4 403 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 ZNF280DQ6N043 979 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 TMCO3Q6UWJ1 677 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 STAG1Q8WVM7 1258 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 CELF1Q92879 486 aaKnown RBP15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 NOL10Q9BSC4 688 aaKnown RBP15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 BRMS1Q9HCU9 246 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 GDAQ9Y2T3 454 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
KCNIP3-201ENST00000295225 UBR2Q8IWV8 1755 aa15□□□□□ -0.01
KCNIP3-201ENST00000295225 ARHGAP6O43182 974 aa15□□□□□ -0.01
KCNIP3-201ENST00000295225 RHOXF2BP0C7M4 288 aa15□□□□□ -0.01
KCNIP3-201ENST00000295225 PRDX5P30044 214 aa15□□□□□ -0.01
KCNIP3-201ENST00000295225 RHOXF2Q9BQY4 288 aa15□□□□□ -0.01
KCNIP3-201ENST00000295225 SRPRBQ9Y5M8 271 aaKnown RBP15□□□□□ -0.01
KCNIP3-201ENST00000295225 SARSP49591 514 aaKnown RBP15□□□□□ -0.01
KCNIP3-201ENST00000295225 IL17AQ16552 155 aa15□□□□□ -0.01
KCNIP3-201ENST00000295225 ZNF569Q5MCW4 686 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms