RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CDKAL1Q5VV42 579 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 TRAPPC11Q7Z392 1133 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 PSMB7Q99436 277 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 NAPBQ9H115 298 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 RGPD2P0DJD1 1756 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 KCNJ18B7U540 433 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 KIAA0754O94854 1291 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 CABP4P57796 275 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 KCNJ12Q14500 433 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 IGDCC4Q8TDY8 1250 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 EEF2KMTQ96G04 330 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 VPS54Q9P1Q0 977 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 ZSWIM5Q9P217 1185 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 IDEP14735 1019 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 ATP1A2P50993 1020 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 TTF1Q15361 905 aaPredicted RBP11.54□□□□□ -0.56
LMX1A-201ENST00000294816 LUC7L2Q9Y383 392 aaKnown RBP11.54□□□□□ -0.56
LMX1A-201ENST00000294816 ZNF532Q9HCE3 1301 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 ERICH2A1L162 156 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 NDUFAB1O14561 156 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 USP8P40818 1118 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 PPFIA1Q13136 1202 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 NBPF14Q5TI25 921 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 SUGP1Q8IWZ8 645 aaKnown RBP11.54□□□□□ -0.56
LMX1A-201ENST00000294816 NELFBQ8WX92 580 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 CENPHQ9H3R5 247 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 REXO2Q9Y3B8 237 aaKnown RBP11.54□□□□□ -0.56
LMX1A-201ENST00000294816 LTN1O94822 1766 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 PRDM1O75626 825 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 SLC7A5Q01650 507 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 LRP10Q7Z4F1 713 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 RASSF8Q8NHQ8 419 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 RRP36Q96EU6 259 aaKnown RBP11.54□□□□□ -0.56
LMX1A-201ENST00000294816 HAUS4Q9H6D7 363 aa11.54□□□□□ -0.56
LMX1A-201ENST00000294816 WDR19Q8NEZ3 1342 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 CPP00450 1065 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 IFNAR1P17181 557 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 PPARAQ07869 468 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 PAK1Q13153 545 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 PDCLQ13371 301 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 WTAPQ15007 396 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 RNF187Q5TA31 235 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-201ENST00000294816 KCTD16Q68DU8 428 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 ELOA2Q8IYF1 753 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-201ENST00000294816 OR8K1Q8NGG5 319 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 CXorf56Q9H5V9 222 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 MYH8P13535 1937 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 AGPSO00116 658 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 KRT86O43790 486 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 PHKG2P15735 406 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 MCAMP43121 646 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
LMX1A-201ENST00000294816 CCNI2Q6ZMN8 369 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-201ENST00000294816 OTUD6BQ8N6M0 293 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 FOXP1Q9H334 677 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-201ENST00000294816 STRN4Q9NRL3 753 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 OVOS2A0A0G2JMS6 1433 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 ADD2P35612 726 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 CYP27A1Q02318 531 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 TEX2Q8IWB9 1127 aa11.53□□□□□ -0.56
LMX1A-201ENST00000294816 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
LMX1A-201ENST00000294816 PIH1D3Q9NQM4 214 aaKnown RBP11.53□□□□□ -0.56
LMX1A-201ENST00000294816 PDE2AO00408 941 aaPredicted RBP11.52□□□□□ -0.56
LMX1A-201ENST00000294816 DEXIO95424 95 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 TDO2P48775 406 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 SPAG1Q07617 926 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 TCP11X2Q5H9J9 407 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 IFNL2Q8IZJ0 200 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.56
LMX1A-201ENST00000294816 FAM89AQ96GI7 184 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 GSDMAQ96QA5 445 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.56
LMX1A-201ENST00000294816 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.56
LMX1A-201ENST00000294816 GDAQ9Y2T3 454 aa11.52□□□□□ -0.56
LMX1A-201ENST00000294816 ITIH6Q6UXX5 1313 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 TRIM49BA6NDI0 452 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 MYO1FO00160 1098 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 DNA2P51530 1060 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 HERVK_113P62684 666 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 TRIM14Q14142 442 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.57
LMX1A-201ENST00000294816 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 POTEDQ86YR6 584 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 NBPF15Q8N660 670 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 DUSP10Q9Y6W6 482 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 LMO7Q8WWI1 1683 aa11.52□□□□□ -0.57
LMX1A-201ENST00000294816 PSMD14O00487 310 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 EIF3HO15372 352 aaKnown RBP eCLIP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 IFIT5Q13325 482 aaKnown RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 SH2D3CQ8N5H7 860 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 HDAC7Q8WUI4 952 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 CEP89Q96ST8 783 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms