RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 IFNKQ9P0W0 207 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 TBC1D12O60347 775 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 ELF1P32519 619 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 HAUS3Q68CZ6 603 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 ANKRD2Q9GZV1 360 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
SLX4-201ENST00000294008 HMG20BQ9P0W2 317 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 SPTLC2O15270 562 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 SLC1A4P43007 532 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 RAB44Q7Z6P3 723 aaPredicted RBP13.69□□□□□ -0.22
SLX4-201ENST00000294008 GGA1Q9UJY5 639 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 CCNL1Q9UK58 526 aaPredicted RBP13.69□□□□□ -0.22
SLX4-201ENST00000294008 TEKT4Q8WW24 435 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 NEMP1O14524 444 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 ADAT2Q7Z6V5 191 aaKnown RBP13.69□□□□□ -0.22
SLX4-201ENST00000294008 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 LIG4P49917 911 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 CCDC13Q8IYE1 715 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 ARFGAP2Q8N6H7 521 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 TTC25Q96NG3 672 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 GBP5Q96PP8 586 aa13.69□□□□□ -0.22
SLX4-201ENST00000294008 ALAS1P13196 640 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 ARHGAP4P98171 946 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 RAB20Q9NX57 234 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 M0R2C6 588 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 OTUD7BQ6GQQ9 843 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 TRMT10CQ7L0Y3 403 aaKnown RBP13.68□□□□□ -0.22
SLX4-201ENST00000294008 PA2G4Q9UQ80 394 aaKnown RBP13.68□□□□□ -0.22
SLX4-201ENST00000294008 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
SLX4-201ENST00000294008 RBM8AQ9Y5S9 174 aaKnown RBP13.68□□□□□ -0.22
SLX4-201ENST00000294008 ABCB4P21439 1286 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 DLGAP5Q15398 846 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 LMNB1P20700 586 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 CLCA2Q9UQC9 943 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 SUPT3HB4E1H0 165 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
SLX4-201ENST00000294008 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 CCPG1Q9ULG6 757 aa13.68□□□□□ -0.22
SLX4-201ENST00000294008 FAF1Q9UNN5 650 aaPredicted RBP13.68□□□□□ -0.22
SLX4-201ENST00000294008 DLATP10515 647 aaKnown RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 PPWD1Q96BP3 646 aaKnown RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 DNM3Q9UQ16 869 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 MSH6P52701 1360 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 H3BRJ5 948 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 BRD2P25440 801 aaKnown RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 HSP90AA5PQ58FG0 334 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 OTUD6AQ7L8S5 288 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 DDAH1O94760 285 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 KDRP35968 1356 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 ZBTB8OSQ8IWT0 167 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 DACT1Q9NYF0 836 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 WIZO95785 1651 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 MBD4O95243 580 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 RNF219Q5W0B1 726 aaPredicted RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 METTL23Q86XA0 190 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 CCDC138Q96M89 665 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 AP5M1Q9H0R1 490 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 HESX1Q9UBX0 185 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 DPYSL4O14531 572 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 GPC4O75487 556 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 KCNA1Q09470 495 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 PIDD1Q9HB75 910 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 A6NJR5 290 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 BCRP11274 1271 aa13.67□□□□□ -0.22
SLX4-201ENST00000294008 NSUN2Q08J23 767 aaKnown RBP eCLIP13.67□□□□□ -0.22
SLX4-201ENST00000294008 UHMK1Q8TAS1 419 aaKnown RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 CDV3Q9UKY7 258 aaKnown RBP13.67□□□□□ -0.22
SLX4-201ENST00000294008 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 SNX19Q92543 992 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 G3BP2Q9UN86 482 aaKnown RBP13.66□□□□□ -0.22
SLX4-201ENST00000294008 GNAT2P19087 354 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 EEF1B2P24534 225 aaKnown RBP13.66□□□□□ -0.22
SLX4-201ENST00000294008 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.22
SLX4-201ENST00000294008 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 BBS5Q8N3I7 341 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 SNX29Q8TEQ0 813 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 H7C0C1 242 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 ATP5OP48047 213 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 TRIM14Q14142 442 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 ZSCAN22P10073 491 aaPredicted RBP13.66□□□□□ -0.22
SLX4-201ENST00000294008 YWHAEP62258 255 aaKnown RBP13.66□□□□□ -0.22
SLX4-201ENST00000294008 CC2D2BQ6DHV5 1058 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 DNM1Q05193 864 aaKnown RBP13.66□□□□□ -0.22
SLX4-201ENST00000294008 HPS4Q9NQG7 708 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 LONRF2Q1L5Z9 754 aa13.66□□□□□ -0.22
SLX4-201ENST00000294008 ARMT1Q9H993 441 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms