RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 WNT7AO00755 349 aa17.21■□□□□ 0.35
CCDC116-201ENST00000292779 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
CCDC116-201ENST00000292779 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
CCDC116-201ENST00000292779 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.35
CCDC116-201ENST00000292779 A0A087X0B3 334 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 ORC4O43929 436 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 GOLGA8FQ08AF8 430 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 GOLGA8DPQ0D2H9 430 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 NOM1Q5C9Z4 860 aaKnown RBP17.21■□□□□ 0.34
CCDC116-201ENST00000292779 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 TRMT44Q8IYL2 757 aaKnown RBP17.21■□□□□ 0.34
CCDC116-201ENST00000292779 TRIML1Q8N9V2 468 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 DHX58Q96C10 678 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 EPSTI1Q96J88 318 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.34
CCDC116-201ENST00000292779 DACH1Q9UI36 760 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.34
CCDC116-201ENST00000292779 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.34
CCDC116-201ENST00000292779 MORC2Q9Y6X9 1032 aaPredicted RBP17.21■□□□□ 0.34
CCDC116-201ENST00000292779 CNTNAP5Q8WYK1 1306 aa17.2■□□□□ 0.34
CCDC116-201ENST00000292779 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
CCDC116-201ENST00000292779 POLRMTO00411 1230 aaKnown RBP17.2■□□□□ 0.34
CCDC116-201ENST00000292779 CYP2D6P10635 497 aa17.2■□□□□ 0.34
CCDC116-201ENST00000292779 NPY5RQ15761 445 aa17.2■□□□□ 0.34
CCDC116-201ENST00000292779 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
CCDC116-201ENST00000292779 SPATA20Q8TB22 786 aa17.2■□□□□ 0.34
CCDC116-201ENST00000292779 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
CCDC116-201ENST00000292779 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
CCDC116-201ENST00000292779 NPHP1O15259 732 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 SERPINB2P05120 415 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 ZNF18P17022 549 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 ENOX1Q8TC92 643 aaKnown RBP17.19■□□□□ 0.34
CCDC116-201ENST00000292779 TNFRSF25Q93038 417 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 MED15Q96RN5 788 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 BRMS1Q9HCU9 246 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 ZNF174Q15697 407 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 SYT10Q6XYQ8 523 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
CCDC116-201ENST00000292779 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
CCDC116-201ENST00000292779 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
CCDC116-201ENST00000292779 SYMPKQ92797 1274 aaKnown RBP17.18■□□□□ 0.34
CCDC116-201ENST00000292779 AFMP43652 599 aa17.18■□□□□ 0.34
CCDC116-201ENST00000292779 SLC15A2Q16348 729 aa17.18■□□□□ 0.34
CCDC116-201ENST00000292779 SLC4A8Q2Y0W8 1093 aa17.18■□□□□ 0.34
CCDC116-201ENST00000292779 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
CCDC116-201ENST00000292779 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
CCDC116-201ENST00000292779 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
CCDC116-201ENST00000292779 SLFN14P0C7P3 912 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 PLCD1P51178 756 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 CBX1P83916 185 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 TTC38Q5R3I4 469 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 SAMSN1Q9NSI8 373 aaKnown RBP17.17■□□□□ 0.34
CCDC116-201ENST00000292779 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
CCDC116-201ENST00000292779 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC116-201ENST00000292779 V9GYY5 206 aaPredicted RBP17.17■□□□□ 0.34
CCDC116-201ENST00000292779 BMP15O95972 392 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 TBX2Q13207 712 aaPredicted RBP17.17■□□□□ 0.34
CCDC116-201ENST00000292779 SBK1Q52WX2 424 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 PAGE5Q96GU1 130 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 ANKIB1Q9P2G1 1089 aa17.17■□□□□ 0.34
CCDC116-201ENST00000292779 TSPY2A6NKD2 308 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 CCP110O43303 1012 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 SLU7O95391 586 aaKnown RBP17.16■□□□□ 0.34
CCDC116-201ENST00000292779 CASP1P29466 404 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 DZIP1Q86YF9 867 aaKnown RBP17.16■□□□□ 0.34
CCDC116-201ENST00000292779 HOMER1Q86YM7 354 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 TMEM139Q8IV31 216 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 CGNQ9P2M7 1197 aaKnown RBP17.16■□□□□ 0.34
CCDC116-201ENST00000292779 VWA3AA6NCI4 1184 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 SCG2P13521 617 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
CCDC116-201ENST00000292779 ERCC5P28715 1186 aaPredicted RBP17.16■□□□□ 0.34
CCDC116-201ENST00000292779 PTGDRQ13258 359 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 CCDC34Q96HJ3 373 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 MCM9Q9NXL9 1143 aa17.16■□□□□ 0.34
CCDC116-201ENST00000292779 USP17L8P0C7I0 530 aa17.15■□□□□ 0.34
CCDC116-201ENST00000292779 NLRP5P59047 1200 aa17.15■□□□□ 0.34
CCDC116-201ENST00000292779 ATP2C1P98194 919 aaPredicted RBP17.15■□□□□ 0.34
CCDC116-201ENST00000292779 RCSD1Q6JBY9 416 aa17.15■□□□□ 0.34
CCDC116-201ENST00000292779 L2HGDHQ9H9P8 463 aa17.15■□□□□ 0.34
CCDC116-201ENST00000292779 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
CCDC116-201ENST00000292779 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
CCDC116-201ENST00000292779 TUBB4AP04350 444 aa17.14■□□□□ 0.33
CCDC116-201ENST00000292779 MMP10P09238 476 aa17.14■□□□□ 0.33
CCDC116-201ENST00000292779 PFKFB3Q16875 520 aaPredicted RBP17.14■□□□□ 0.33
CCDC116-201ENST00000292779 SPECC1LQ69YQ0 1117 aa17.14■□□□□ 0.33
CCDC116-201ENST00000292779 PIK3AP1Q6ZUJ8 805 aa17.14■□□□□ 0.33
CCDC116-201ENST00000292779 CD44P16070 742 aaKnown RBP17.14■□□□□ 0.33
CCDC116-201ENST00000292779 ETF1P62495 437 aaKnown RBP17.14■□□□□ 0.33
CCDC116-201ENST00000292779 DPYDQ12882 1025 aa17.14■□□□□ 0.33
CCDC116-201ENST00000292779 REXO1L1PQ8IX06 675 aa17.14■□□□□ 0.33
CCDC116-201ENST00000292779 ARHGAP6O43182 974 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 BAG6P46379 1132 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 SPTY2D1Q68D10 685 aaPredicted RBP17.13■□□□□ 0.33
CCDC116-201ENST00000292779 KLHL10Q6JEL2 608 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 TC2NQ8N9U0 490 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms