RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MECOMQ03112 1051 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 PAK1Q13153 545 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 SPATA31A3Q5VYP0 1347 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 NCOA3Q9Y6Q9 1424 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 H7C1W4 665 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 ZMYND10O75800 440 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 KRT9P35527 623 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 LRRC41Q15345 812 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 RNF187Q5TA31 235 aaPredicted RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 TYW1BQ6NUM6 668 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CLEC17AQ6ZS10 378 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CELF1Q92879 486 aaKnown RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 ZNF609O15014 1411 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 SHPRHQ149N8 1683 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CTAGE15A4D2H0 777 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 KLRF2D3W0D1 207 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 ENC1O14682 589 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CTAGE8P0CG41 777 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 SLC1A4P43007 532 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CYP4A11Q02928 519 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 SV2BQ7L1I2 683 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CTAGE6Q86UF2 777 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CTAGE4Q8IX94 777 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 ANKRD13CQ8N6S4 541 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CTAGE1Q96RT6 745 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 ZNF215Q9UL58 517 aaPredicted RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 KIF28PB7ZC32 967 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 TMEM232C9JQI7 657 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 ATG9AQ7Z3C6 839 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 CABP7Q86V35 215 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 KRT222Q8N1A0 295 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 ALS2CR12Q96Q35 445 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 TRIM31Q9BZY9 425 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 FRMPD1Q5SYB0 1578 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 FAM13AO94988 1023 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 GDF11O95390 407 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 FGFR1OPO95684 399 aaKnown RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 GNA11P29992 359 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 GNAQP50148 359 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 NKX1-1Q15270 411 aaPredicted RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 ADAT2Q7Z6V5 191 aaKnown RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 NEK11Q8NG66 645 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 OVOS2A0A0J9YW53 1432 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 OVOS2Q6IE36 1432 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 HGSO14964 777 aaPredicted RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 ERLIN2O94905 339 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 KRT13P13646 458 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 COL9A3Q14050 684 aaPredicted RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 KRBA2Q6ZNG9 492 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.37□□□□□ -1.55
UBR1-201ENST00000290650 USP27XA6NNY8 438 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 SH2B2O14492 632 aaPredicted RBP5.37□□□□□ -1.55
UBR1-201ENST00000290650 KIF5AQ12840 1032 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 IQCEQ6IPM2 695 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 FAM114A1Q8IWE2 563 aa5.37□□□□□ -1.55
UBR1-201ENST00000290650 GSTTP1A0A1W2PQM5 241 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 MEIS1O00470 390 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 BUB1O43683 1085 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 SEC31AO94979 1220 aaKnown RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 PRR29P0C7W0 189 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 UBE2SQ16763 222 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 LINC00301Q8NCQ3 95 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 SH3RF3Q8TEJ3 882 aaPredicted RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 GOLGA1Q92805 767 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 ADAMTS13Q76LX8 1427 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 FAM205CA6NFA0 338 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 ZEB2O60315 1214 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 CYLC1P35663 651 aaPredicted RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 BMS1Q14692 1282 aaKnown RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 HERC4Q5GLZ8 1057 aaPredicted RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 WDR66Q8TBY9 1149 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 DYDC1Q8WWB3 177 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 MRRFQ96E11 262 aaKnown RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 PDIA6Q15084 440 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 PRR16Q569H4 304 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 PAXIP1Q6ZW49 1069 aaPredicted RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 CCDC25Q86WR0 208 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 TPH2Q8IWU9 490 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 BLIDQ8IZY5 108 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 EPC1Q9H2F5 836 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 LRWD1Q9UFC0 647 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 RSPH14Q9UHP6 348 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 SOWAHDA6NJG2 315 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 KIAA0754O94854 1291 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 SEPT7Q16181 437 aaKnown RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 CLEC10AQ8IUN9 316 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 CIAO1O76071 339 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 GCNT3O95395 438 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 SCG2P13521 617 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 MORC3Q14149 939 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 CCDC144BQ3MJ40 725 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 MXD3Q9BW11 206 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 THRAP3Q9Y2W1 955 aaKnown RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 LMTK2Q8IWU2 1503 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.36□□□□□ -1.55
UBR1-201ENST00000290650 PP2D1A8MPX8 630 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 MIGA2Q7L4E1 593 aa5.36□□□□□ -1.55
UBR1-201ENST00000290650 RRAGAQ7L523 313 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms