RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 SOCS4Q8WXH5 440 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 APPBP2Q92624 585 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 DPF3Q92784 378 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 GPATCH3Q96I76 525 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 EPB41L4AQ9HCS5 686 aaPredicted RBP11.46□□□□□ -0.57
HMHB1-201ENST00000289448 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.57
HMHB1-201ENST00000289448 TMX2Q9Y320 296 aa11.46□□□□□ -0.57
HMHB1-201ENST00000289448 MYH7P12883 1935 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 GPAA1O43292 621 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 EEF2P13639 858 aaKnown RBP11.45□□□□□ -0.58
HMHB1-201ENST00000289448 RGS2P41220 211 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 MAP2K5Q13163 448 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 COG2Q14746 738 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 SBK1Q52WX2 424 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 CCAR1Q8IX12 1150 aaKnown RBP11.45□□□□□ -0.58
HMHB1-201ENST00000289448 STK11IPQ8N1F8 1099 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 GCC1Q96CN9 775 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 PAWRQ96IZ0 340 aaKnown RBP11.45□□□□□ -0.58
HMHB1-201ENST00000289448 CCDC17Q96LX7 622 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 SEC62Q99442 399 aaKnown RBP11.45□□□□□ -0.58
HMHB1-201ENST00000289448 TANGO6Q9C0B7 1094 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 VCPKMTQ9H867 229 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 HMX1Q9NP08 348 aaPredicted RBP11.45□□□□□ -0.58
HMHB1-201ENST00000289448 HOXC10Q9NYD6 342 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 FLRT1Q9NZU1 646 aa11.45□□□□□ -0.58
HMHB1-201ENST00000289448 TTC41PQ6P2S7 1318 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 ZKSCAN1P17029 563 aaPredicted RBP11.44□□□□□ -0.58
HMHB1-201ENST00000289448 RASA1P20936 1047 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 PTPREP23469 700 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 CCND3P30281 292 aaPredicted RBP11.44□□□□□ -0.58
HMHB1-201ENST00000289448 DSG3P32926 999 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 CCNA1P78396 465 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 WDR78Q5VTH9 848 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 DDRGK1Q96HY6 314 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 APBA2Q99767 749 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 MOV10L1Q9BXT6 1211 aaKnown RBP11.44□□□□□ -0.58
HMHB1-201ENST00000289448 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 ARPP21Q9UBL0 812 aaPredicted RBP11.44□□□□□ -0.58
HMHB1-201ENST00000289448 RLFQ13129 1914 aa11.44□□□□□ -0.58
HMHB1-201ENST00000289448 SLC15A5A6NIM6 579 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 MINDY4BA8MYZ0 360 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 GLRX3O76003 335 aaKnown RBP11.43□□□□□ -0.58
HMHB1-201ENST00000289448 IGHA2P01877 340 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 ZFYP08048 801 aaPredicted RBP11.43□□□□□ -0.58
HMHB1-201ENST00000289448 MX1P20591 662 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 ATP2B2Q01814 1243 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 GRB14Q14449 540 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 LHX8Q68G74 356 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 GIMAP6Q6P9H5 292 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 NPLOC4Q8TAT6 608 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 LPAR1Q92633 364 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 HTATIP2Q9BUP3 242 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 SPATC1LQ9H0A9 340 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 KANSL2Q9H9L4 492 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 OGDHLQ9ULD0 1010 aa11.43□□□□□ -0.58
HMHB1-201ENST00000289448 ROBO3Q96MS0 1386 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 PATL2C9JE40 543 aaKnown RBP11.42□□□□□ -0.58
HMHB1-201ENST00000289448 ERC2O15083 957 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 WDR46O15213 610 aaKnown RBP11.42□□□□□ -0.58
HMHB1-201ENST00000289448 FOXP2O15409 715 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 FLOT1O75955 427 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 HOXC6P09630 235 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 CAPN2P17655 700 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 ERCC3P19447 782 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
HMHB1-201ENST00000289448 ANKRD45Q5TZF3 282 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
HMHB1-201ENST00000289448 CHRDL2Q6WN34 429 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 TRMT44Q8IYL2 757 aaKnown RBP11.42□□□□□ -0.58
HMHB1-201ENST00000289448 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 CWC22Q9HCG8 908 aaKnown RBP11.42□□□□□ -0.58
HMHB1-201ENST00000289448 FBXO28Q9NVF7 368 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 ADAMTS5Q9UNA0 930 aa11.42□□□□□ -0.58
HMHB1-201ENST00000289448 LAMA2P24043 3122 aaKnown RBP11.41□□□□□ -0.58
HMHB1-201ENST00000289448 IGKV6D-41A0A0C4DH26 115 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 COBLO75128 1261 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 PRDM1O75626 825 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 APPP05067 770 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 GNAT2P19087 354 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 ADORA2AP29274 412 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 TDO2P48775 406 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 FXR1P51114 621 aaKnown RBP eCLIP11.41□□□□□ -0.58
HMHB1-201ENST00000289448 TMEM132BQ14DG7 1078 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 NECAB2Q7Z6G3 386 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 SHCBP1Q8NEM2 672 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 TRPV1Q8NER1 839 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 NUP88Q99567 741 aaPredicted RBP11.41□□□□□ -0.58
HMHB1-201ENST00000289448 FSD1Q9BTV5 496 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 PRO3102Q9H379 93 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
HMHB1-201ENST00000289448 IVNS1ABPQ9Y6Y0 642 aa11.41□□□□□ -0.58
HMHB1-201ENST00000289448 PFASO15067 1338 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms