RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CD2BP2O95400 341 aaKnown RBP19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 PNMA6AP0CW24 399 aaPredicted RBP19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 HNRNPH2P55795 449 aaKnown RBP19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 RPS6KA1Q15418 735 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 MAP3K21Q5TCX8 1036 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 GSTA5Q7RTV2 222 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 LSG1Q9H089 658 aaKnown RBP19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 ATP6V0A2Q9Y487 856 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 RIPOR2Q9Y4F9 1068 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 CHD1O14646 1710 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 POLR2DO15514 142 aaKnown RBP19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 MICAL1Q8TDZ2 1067 aa19.43■□□□□ 0.7
PCDHA13-201ENST00000289272 EVI5O60447 810 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 ALS2CLQ60I27 953 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 EDC3Q96F86 508 aaKnown RBP19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 ERCC5P28715 1186 aaPredicted RBP19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 OTUD7BQ6GQQ9 843 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 FAN1Q9Y2M0 1017 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 SAMM50Q9Y512 469 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 TRIM37O94972 964 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 MCM7P33993 719 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 DENND2CQ68D51 928 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 HS2ST1Q7LGA3 356 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 SLF1Q9BQI6 1058 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 LRRD1A4D1F6 860 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 DTNBO60941 627 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 RTEL1Q9NZ71 1219 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 TPCN1Q9ULQ1 816 aa19.42■□□□□ 0.7
PCDHA13-201ENST00000289272 GNA14O95837 355 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 PFKFB1P16118 471 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 ARMT1Q9H993 441 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 MYO1CO00159 1063 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 DNM2P50570 870 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 SUPT20HQ8NEM7 779 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 REREQ9P2R6 1566 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 FLOT1O75955 427 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 CACTINQ8WUQ7 758 aaKnown RBP19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 LPIN2Q92539 896 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 KLHL14Q9P2G3 628 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 PHKG2P15735 406 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 KRT71Q3SY84 523 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 SPATA1Q5VX52 437 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 RUNDC3BQ96NL0 473 aa19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 IFIH1Q9BYX4 1025 aaKnown RBP19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 CPSF1Q10570 1443 aaKnown RBP19.41■□□□□ 0.7
PCDHA13-201ENST00000289272 MROH5Q6ZUA9 1318 aa19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 FAM184BQ9ULE4 1060 aa19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 ZAP70P43403 619 aa19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 DIS3L2Q8IYB7 885 aaKnown RBP19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 GLT8D2Q9H1C3 349 aa19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 CASQ2O14958 399 aaPredicted RBP19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 HIBADHP31937 336 aaKnown RBP19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 CCT5P48643 541 aa19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 PICALMQ13492 652 aa19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 HOOK2Q96ED9 719 aa19.4■□□□□ 0.7
PCDHA13-201ENST00000289272 CTNNA1P35221 906 aaKnown RBP19.39■□□□□ 0.7
PCDHA13-201ENST00000289272 FBXO38Q6PIJ6 1188 aa19.39■□□□□ 0.7
PCDHA13-201ENST00000289272 UNC5CLQ8IV45 518 aa19.39■□□□□ 0.7
PCDHA13-201ENST00000289272 H7C1D1 291 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 HAUS7Q99871 368 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 CNOT10Q9H9A5 744 aaKnown RBP19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 ODF2LQ9ULJ1 636 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 TRPC3Q13507 836 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 KRT40Q6A162 431 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 ROBO2Q9HCK4 1378 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 VWA3AA6NCI4 1184 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 SPDYE3A6NKU9 549 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 EPB41P11171 864 aaKnown RBP19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 PDE4DQ08499 809 aa19.39■□□□□ 0.69
PCDHA13-201ENST00000289272 RETREG2Q8NC44 543 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 NELFBQ8WX92 580 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 MADDQ8WXG6 1647 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 PRR36Q9H6K5 1346 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 F8W031 263 aaPredicted RBP19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 PPP6R2O75170 966 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 MAP4K1Q92918 833 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 RGS16O15492 202 aaPredicted RBP19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 TADA2BQ86TJ2 420 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 COPRSQ9NQ92 184 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 GGA1Q9UJY5 639 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 SMIM23A6NLE4 172 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 CCDC169A6NNP5 214 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 ZNF174Q15697 407 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 MSANTD4Q8NCY6 345 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 RNASELQ05823 741 aaKnown RBP19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 TCIRG1Q13488 830 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 RAPGEF1Q13905 1077 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 NBPF9Q3BBW0 867 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 FLAD1Q8NFF5 587 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 VCX3AQ9NNX9 186 aa19.38■□□□□ 0.69
PCDHA13-201ENST00000289272 MUM1Q2TAK8 710 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 SFMBT2Q5VUG0 894 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 DNAJC10Q8IXB1 793 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 RASEFQ8IZ41 740 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 PPP1R12CQ9BZL4 782 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 PAXIP1Q6ZW49 1069 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms