RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 IFNL1Q8IU54 200 aa18.07■□□□□ 0.48
NCK1-201ENST00000288986 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
NCK1-201ENST00000288986 TCP11L1Q9NUJ3 509 aa18.07■□□□□ 0.48
NCK1-201ENST00000288986 TMX2Q9Y320 296 aa18.07■□□□□ 0.48
NCK1-201ENST00000288986 DDIT3P35638 169 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 SH3D19Q5HYK7 790 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 CYB5R4Q7L1T6 521 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 UBAC1Q9BSL1 405 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 PHIPQ8WWQ0 1821 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 BTBD19C9JJ37 291 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 IGF2BP3O00425 579 aaKnown RBP eCLIP18.06■□□□□ 0.48
NCK1-201ENST00000288986 MOGSQ13724 837 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 KRT32Q14532 448 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 FAM43AQ8N2R8 423 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 PROCA1Q8NCQ7 364 aaPredicted RBP18.06■□□□□ 0.48
NCK1-201ENST00000288986 NEK1Q96PY6 1258 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 ZSCAN10Q96SZ4 725 aaPredicted RBP18.06■□□□□ 0.48
NCK1-201ENST00000288986 BEGAINQ9BUH8 593 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 EMILIN3Q9NT22 766 aa18.06■□□□□ 0.48
NCK1-201ENST00000288986 SPICE1Q8N0Z3 855 aa18.05■□□□□ 0.48
NCK1-201ENST00000288986 LRRC47Q8N1G4 583 aaKnown RBP18.05■□□□□ 0.48
NCK1-201ENST00000288986 MKL1Q969V6 931 aa18.05■□□□□ 0.48
NCK1-201ENST00000288986 GOPCQ9HD26 462 aa18.05■□□□□ 0.48
NCK1-201ENST00000288986 PSMA5P28066 241 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 CCDC178Q5BJE1 867 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 TREML2Q5T2D2 321 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 GPAT2Q6NUI2 795 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 JAKMIP1Q96N16 626 aaKnown RBP18.04■□□□□ 0.48
NCK1-201ENST00000288986 TNKSO95271 1327 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 ERICH2A1L162 156 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 PDHXO00330 501 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
NCK1-201ENST00000288986 RUFY3Q7L099 469 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 ANKRD23Q86SG2 305 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 MB21D2Q8IYB1 491 aaPredicted RBP18.04■□□□□ 0.48
NCK1-201ENST00000288986 JMYQ8N9B5 988 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 VCPKMTQ9H867 229 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 AGTPBP1Q9UPW5 1226 aa18.04■□□□□ 0.48
NCK1-201ENST00000288986 F5H6K3 240 aa18.03■□□□□ 0.48
NCK1-201ENST00000288986 IFIT3O14879 490 aaKnown RBP18.03■□□□□ 0.48
NCK1-201ENST00000288986 TRPA1O75762 1119 aa18.03■□□□□ 0.48
NCK1-201ENST00000288986 ALDH1A1P00352 501 aa18.03■□□□□ 0.48
NCK1-201ENST00000288986 MCM5P33992 734 aa18.03■□□□□ 0.48
NCK1-201ENST00000288986 KLRC3Q07444 240 aa18.03■□□□□ 0.48
NCK1-201ENST00000288986 SART3Q15020 963 aaKnown RBP18.03■□□□□ 0.48
NCK1-201ENST00000288986 DGKHQ86XP1 1220 aa18.03■□□□□ 0.48
NCK1-201ENST00000288986 ALDH8A1Q9H2A2 487 aaPredicted RBP18.03■□□□□ 0.48
NCK1-201ENST00000288986 GREB1LQ9C091 1923 aaPredicted RBP18.03■□□□□ 0.48
NCK1-201ENST00000288986 VCAM1P19320 739 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 KIAA1755Q5JYT7 1200 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 RCSD1Q6JBY9 416 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 ENAHQ8N8S7 591 aaPredicted RBP18.02■□□□□ 0.48
NCK1-201ENST00000288986 LPAR1Q92633 364 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 TMEM47Q9BQJ4 181 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 RNF186Q9NXI6 227 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 MTMR7Q9Y216 660 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 CYP46A1Q9Y6A2 500 aa18.02■□□□□ 0.48
NCK1-201ENST00000288986 PRC1O43663 620 aa18.02■□□□□ 0.47
NCK1-201ENST00000288986 TOP1P11387 765 aaKnown RBP18.02■□□□□ 0.47
NCK1-201ENST00000288986 NOVP48745 357 aa18.02■□□□□ 0.47
NCK1-201ENST00000288986 PABPC4Q13310 644 aaKnown RBP eCLIP18.02■□□□□ 0.47
NCK1-201ENST00000288986 CUL4AQ13619 759 aa18.02■□□□□ 0.47
NCK1-201ENST00000288986 COL9A3Q14050 684 aaPredicted RBP18.02■□□□□ 0.47
NCK1-201ENST00000288986 IFIT1BQ5T764 474 aaKnown RBP18.02■□□□□ 0.47
NCK1-201ENST00000288986 TMX3Q96JJ7 454 aa18.02■□□□□ 0.47
NCK1-201ENST00000288986 SLKQ9H2G2 1235 aaPredicted RBP18.02■□□□□ 0.47
NCK1-201ENST00000288986 WBP1LQ9NX94 342 aa18.02■□□□□ 0.47
NCK1-201ENST00000288986 HMGB1P09429 215 aaKnown RBP18.01■□□□□ 0.47
NCK1-201ENST00000288986 ANTXR2P58335 489 aa18.01■□□□□ 0.47
NCK1-201ENST00000288986 TAF1CQ15572 869 aaPredicted RBP18.01■□□□□ 0.47
NCK1-201ENST00000288986 RPAP3Q9H6T3 665 aaPredicted RBP18.01■□□□□ 0.47
NCK1-201ENST00000288986 KAT14Q9H8E8 782 aa18.01■□□□□ 0.47
NCK1-201ENST00000288986 SYNPO2Q9UMS6 1093 aa18.01■□□□□ 0.47
NCK1-201ENST00000288986 AK2P54819 239 aa18■□□□□ 0.47
NCK1-201ENST00000288986 TMEM67Q5HYA8 995 aa18■□□□□ 0.47
NCK1-201ENST00000288986 NDUFB10O96000 172 aa18■□□□□ 0.47
NCK1-201ENST00000288986 CYP2C8P10632 490 aa18■□□□□ 0.47
NCK1-201ENST00000288986 CPA1P15085 419 aa18■□□□□ 0.47
NCK1-201ENST00000288986 OSBPP22059 807 aa18■□□□□ 0.47
NCK1-201ENST00000288986 RPS6KB1P23443 525 aa18■□□□□ 0.47
NCK1-201ENST00000288986 HOXA7P31268 230 aaPredicted RBP18■□□□□ 0.47
NCK1-201ENST00000288986 WTAPQ15007 396 aa18■□□□□ 0.47
NCK1-201ENST00000288986 SLFN13Q68D06 897 aa18■□□□□ 0.47
NCK1-201ENST00000288986 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
NCK1-201ENST00000288986 DHX32Q7L7V1 743 aaKnown RBP18■□□□□ 0.47
NCK1-201ENST00000288986 GMCL1P1Q8NEA9 526 aa18■□□□□ 0.47
NCK1-201ENST00000288986 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
NCK1-201ENST00000288986 TCEANC2Q96MN5 208 aa18■□□□□ 0.47
NCK1-201ENST00000288986 LRRC2Q9BYS8 371 aa18■□□□□ 0.47
NCK1-201ENST00000288986 TANGO6Q9C0B7 1094 aa18■□□□□ 0.47
NCK1-201ENST00000288986 ZCCHC17Q9NP64 241 aaKnown RBP18■□□□□ 0.47
NCK1-201ENST00000288986 PDRG1Q9NUG6 133 aa18■□□□□ 0.47
NCK1-201ENST00000288986 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
NCK1-201ENST00000288986 SLC45A1Q9Y2W3 748 aa18■□□□□ 0.47
NCK1-201ENST00000288986 PTPRFP10586 1907 aa18■□□□□ 0.47
NCK1-201ENST00000288986 THSD7BQ9C0I4 1608 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L15C9J2P7 530 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms