RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 EXOC1Q9NV70 894 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 SRPRBQ9Y5M8 271 aaKnown RBP17.94■□□□□ 0.46
SMAD6-201ENST00000288840 SCG2P13521 617 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 KLRK1P26718 216 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 TNNI2P48788 182 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 EVX2Q03828 476 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 NCAPHQ15003 741 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 CCDC70Q6NSX1 233 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 SGMS1Q86VZ5 419 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 RBM28Q9NW13 759 aaKnown RBP17.94■□□□□ 0.46
SMAD6-201ENST00000288840 PSMA7O14818 248 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 ARID4AP29374 1257 aaPredicted RBP17.94■□□□□ 0.46
SMAD6-201ENST00000288840 TOB1P50616 345 aaPredicted RBP17.94■□□□□ 0.46
SMAD6-201ENST00000288840 PAGE5Q96GU1 130 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 GPCPD1Q9NPB8 672 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
SMAD6-201ENST00000288840 CHMP4BP1P59074 171 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 ERVV-1B6SEH8 477 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 BMP15O95972 392 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CCDC181Q5TID7 509 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CACNA2D4Q7Z3S7 1137 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 STAG1Q8WVM7 1258 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 RNF26Q9BY78 433 aaPredicted RBP17.93■□□□□ 0.46
SMAD6-201ENST00000288840 FAM217BQ9NTX9 383 aaPredicted RBP17.93■□□□□ 0.46
SMAD6-201ENST00000288840 FBXO2Q9UK22 296 aaPredicted RBP17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CACNA1FO60840 1977 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CDHR2Q9BYE9 1310 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CTAGE15A4D2H0 777 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CTAGE8P0CG41 777 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 DMTNQ08495 405 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 NTRK3Q16288 839 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CTAGE6Q86UF2 777 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 CTAGE4Q8IX94 777 aa17.93■□□□□ 0.46
SMAD6-201ENST00000288840 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
SMAD6-201ENST00000288840 MYO1BO43795 1136 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 PDE4DQ08499 809 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 CUL4BQ13620 913 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 CCDC122Q5T0U0 273 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 SPATA1Q5VX52 437 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 CCDC148Q8NFR7 591 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 ANKRD7Q92527 254 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 TRIM49BA6NDI0 452 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 CTIFO43310 598 aaKnown RBP17.92■□□□□ 0.46
SMAD6-201ENST00000288840 TBC1D8BQ0IIM8 1120 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 SPA17Q15506 151 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 MINPP1Q9UNW1 487 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 OVOS2A0A0G2JMS6 1433 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 MST1RQ04912 1400 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 CALML3P27482 149 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 EARS2Q5JPH6 523 aaKnown RBP17.92■□□□□ 0.46
SMAD6-201ENST00000288840 CNGA4Q8IV77 575 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 CSGALNACT2Q8N6G5 542 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 PLA2G12BQ9BX93 195 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 TBC1D7Q9P0N9 293 aa17.92■□□□□ 0.46
SMAD6-201ENST00000288840 BIN2Q9UBW5 565 aaPredicted RBP17.92■□□□□ 0.46
SMAD6-201ENST00000288840 SLFN14P0C7P3 912 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 ITPK1Q13572 414 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 MORC3Q14149 939 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 NYAP1Q6ZVC0 841 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 AK7Q96M32 723 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 VPS18Q9P253 973 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 AKR1B10O60218 316 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 TEX11Q8IYF3 940 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 BLIDQ8IZY5 108 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 NEK11Q8NG66 645 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 FERMT2Q96AC1 680 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 DDX41Q9UJV9 622 aaKnown RBP17.91■□□□□ 0.46
SMAD6-201ENST00000288840 KCNJ18B7U540 433 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 ZSCAN20P17040 1043 aaPredicted RBP17.91■□□□□ 0.46
SMAD6-201ENST00000288840 TECP42680 631 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 KCNJ12Q14500 433 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 ENOX1Q8TC92 643 aaKnown RBP17.91■□□□□ 0.46
SMAD6-201ENST00000288840 CALML4Q96GE6 196 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 CENPHQ9H3R5 247 aa17.91■□□□□ 0.46
SMAD6-201ENST00000288840 SPTY2D1Q68D10 685 aaPredicted RBP17.9■□□□□ 0.46
SMAD6-201ENST00000288840 SLC35F6Q8N357 371 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
SMAD6-201ENST00000288840 RABEP2Q9H5N1 569 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 RMND1Q9NWS8 449 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 CCNL1Q9UK58 526 aaPredicted RBP17.9■□□□□ 0.46
SMAD6-201ENST00000288840 FRMPD2Q68DX3 1309 aaPredicted RBP17.9■□□□□ 0.46
SMAD6-201ENST00000288840 STX10O60499 249 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 ZMYND10O75800 440 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 NKX1-1Q15270 411 aaPredicted RBP17.9■□□□□ 0.46
SMAD6-201ENST00000288840 ZNF34Q8IZ26 560 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 MAP3K14Q99558 947 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMAD6-201ENST00000288840 UFL1O94874 794 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 RNASE9P60153 205 aaKnown RBP17.9■□□□□ 0.46
SMAD6-201ENST00000288840 TUBE1Q9UJT0 475 aa17.9■□□□□ 0.46
SMAD6-201ENST00000288840 STAG2Q8N3U4 1231 aa17.89■□□□□ 0.45
SMAD6-201ENST00000288840 FAM84BQ96KN1 310 aaPredicted RBP17.89■□□□□ 0.45
SMAD6-201ENST00000288840 MRPS25P82663 173 aaKnown RBP17.89■□□□□ 0.45
SMAD6-201ENST00000288840 CTR9Q6PD62 1173 aa17.89■□□□□ 0.45
SMAD6-201ENST00000288840 LEKR1Q6ZMV7 388 aa17.89■□□□□ 0.45
SMAD6-201ENST00000288840 C3orf67Q6ZVT6 689 aa17.89■□□□□ 0.45
SMAD6-201ENST00000288840 SRBD1Q8N5C6 995 aaKnown RBP17.89■□□□□ 0.45
SMAD6-201ENST00000288840 RUFY1Q96T51 708 aa17.89■□□□□ 0.45
SMAD6-201ENST00000288840 OAS2P29728 719 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms