RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PDE4DQ08499 809 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 SMARCC2Q8TAQ2 1214 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 EPSTI1Q96J88 318 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 ZSCAN10Q96SZ4 725 aaPredicted RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 GPCPD1Q9NPB8 672 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 RBM28Q9NW13 759 aaKnown RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 MED23Q9ULK4 1368 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 NCBP1Q09161 790 aaKnown RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 RAD51AP2Q09MP3 1159 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 PAK1Q13153 545 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 PLA2G4DQ86XP0 818 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 NEDD4P46934 1319 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 KRT86O43790 486 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 TACC1O75410 805 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 SEC31AO94979 1220 aaKnown RBP14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 E2F4Q16254 413 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 FAM98CQ17RN3 349 aaKnown RBP14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 KIAA0753Q2KHM9 967 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 DYMQ7RTS9 669 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 NELFBQ8WX92 580 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 TAOK3Q9H2K8 898 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 CTDNEP1O95476 244 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 LIG3P49916 1009 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 TGFBRAP1Q8WUH2 860 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 STRBPQ96SI9 672 aaKnown RBP14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 GOLGA6CA6NDK9 693 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 CCNT1O60563 726 aaKnown RBP14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 TUBBP07437 444 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 GOLGA6DP0CG33 693 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 RNASE9P60153 205 aaKnown RBP14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 RABL6Q3YEC7 729 aaPredicted RBP14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 CSGALNACT2Q8N6G5 542 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 PLEKHA4Q9H4M7 779 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 GOLGA6AQ9NYA3 693 aa14.04□□□□□ -0.16
SLC6A1-201ENST00000287766 C6orf50Q9HD87 102 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 EXOSC10Q01780 885 aaKnown RBP14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 B4GALNT4Q76KP1 1039 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 SENP2Q9HC62 589 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 NEURL4Q96JN8 1562 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 USP32Q8NFA0 1604 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 ARID4AP29374 1257 aaPredicted RBP14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 FAM114A1Q8IWE2 563 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 MB21D2Q8IYB1 491 aaPredicted RBP14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 TEX11Q8IYF3 940 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 PPP1R1BQ9UD71 204 aaPredicted RBP14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 RTCBQ9Y3I0 505 aaKnown RBP14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 INF2Q27J81 1249 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 TSGA10IPQ3SY00 556 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 MICAL1Q8TDZ2 1067 aa14.03□□□□□ -0.16
SLC6A1-201ENST00000287766 RPS8P62241 208 aaKnown RBP14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 MAN1B1Q9UKM7 699 aa14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 FGFR1OPO95684 399 aaKnown RBP14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 PEX19P40855 299 aa14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 USPL1Q5W0Q7 1092 aa14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 SMIM5Q71RC9 77 aa14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 OXER1Q8TDS5 423 aa14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 NOC4LQ9BVI4 516 aaKnown RBP14.02□□□□□ -0.16
SLC6A1-201ENST00000287766 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 A0A1W2PRG0 241 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 CDC25BP30305 580 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 CETN2P41208 172 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 HOOK3Q86VS8 718 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 DHX40Q8IX18 779 aaKnown RBP14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 EPC1Q9H2F5 836 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 ATG3Q9NT62 314 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 KIF20BQ96Q89 1820 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 UBE2Q2LH0YL09 131 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 SIK1P57059 783 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 C6orf163Q5TEZ5 329 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 FBXO38Q6PIJ6 1188 aa14.02□□□□□ -0.17
SLC6A1-201ENST00000287766 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 MMP1P03956 469 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 CASP14P31944 242 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 IQCB1Q15051 598 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 TMEM132AQ24JP5 1023 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 SPAG5Q96R06 1193 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 NSRP1Q9H0G5 558 aaKnown RBP14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 BAIAP2L1Q9UHR4 511 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 PPP6R2O75170 966 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 FDPSP14324 419 aaKnown RBP14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 GUCY1A2P33402 732 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 PCK1P35558 622 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 TUBB4BP68371 445 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 GSTO1P78417 241 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 NAPGQ99747 312 aaPredicted RBP14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 PARP1P09874 1014 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms