RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 KRT19P08727 400 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 TSGA10Q9BZW7 698 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 CCPG1Q9ULG6 757 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 KDM5CP41229 1560 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 ARHGEF6Q15052 776 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 NEK8Q86SG6 692 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 CCDC84Q86UT8 332 aaPredicted RBP20.62■□□□□ 0.89
PCDH1-201ENST00000287008 SERPINB13Q9UIV8 391 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 ATP10DQ9P241 1426 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 HECW2Q9P2P5 1572 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 RPS6KA4O75676 772 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 KCTD2Q14681 263 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 PPP1R7Q15435 360 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 METTL13Q8N6R0 699 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 FAM107BQ9H098 131 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 CSRNP2Q9H175 543 aa20.62■□□□□ 0.89
PCDH1-201ENST00000287008 GSPT1P15170 499 aaKnown RBP20.61■□□□□ 0.89
PCDH1-201ENST00000287008 ATP2A2P16615 1042 aaKnown RBP20.61■□□□□ 0.89
PCDH1-201ENST00000287008 INF2Q27J81 1249 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 CCDC14Q49A88 953 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 NUP58Q9BVL2 599 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 AMNQ9BXJ7 453 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 FAM169AQ9Y6X4 670 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 NPR1P16066 1061 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 VAV2P52735 878 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 SLU7O95391 586 aaKnown RBP20.61■□□□□ 0.89
PCDH1-201ENST00000287008 DALRD3Q5D0E6 543 aaKnown RBP20.61■□□□□ 0.89
PCDH1-201ENST00000287008 ZBTB8OSQ8IWT0 167 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 TTLL6Q8N841 843 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 SLC9C1Q4G0N8 1177 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 KRT26Q7Z3Y9 468 aa20.61■□□□□ 0.89
PCDH1-201ENST00000287008 MCM6Q14566 821 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 AGTPBP1Q9UPW5 1226 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 PCDHB13Q9Y5F0 798 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 TNNI1P19237 187 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 ASIC2Q16515 512 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 ZMYM1Q5SVZ6 1142 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 NACA2Q9H009 215 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 STMN4Q9H169 189 aaPredicted RBP20.6■□□□□ 0.89
PCDH1-201ENST00000287008 LARSQ9P2J5 1176 aaKnown RBP20.6■□□□□ 0.89
PCDH1-201ENST00000287008 NDC80O14777 642 aa20.6■□□□□ 0.89
PCDH1-201ENST00000287008 PFKFB2O60825 505 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 JAKMIP2Q96AA8 810 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 KANSL2Q9H9L4 492 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 STAP2Q9UGK3 403 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 ZMYM6O95789 1325 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 AFF2P51816 1311 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 LPXNO60711 386 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 CBX1P83916 185 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 FANCCQ00597 558 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 XKR9Q5GH70 373 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 PLA2G4DQ86XP0 818 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 CCDC114Q96M63 670 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 NAP1L3Q99457 506 aaPredicted RBP20.59■□□□□ 0.89
PCDH1-201ENST00000287008 RRP9O43818 475 aaKnown RBP20.59■□□□□ 0.89
PCDH1-201ENST00000287008 BCRP11274 1271 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 SLFN12Q8IYM2 578 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 PAIP2Q9BPZ3 127 aaKnown RBP20.59■□□□□ 0.89
PCDH1-201ENST00000287008 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 GRAPQ13588 217 aa20.59■□□□□ 0.89
PCDH1-201ENST00000287008 SPOUT1Q5T280 376 aaKnown RBP20.59■□□□□ 0.89
PCDH1-201ENST00000287008 GRAPLQ8TC17 118 aaPredicted RBP20.59■□□□□ 0.89
PCDH1-201ENST00000287008 CYP27B1O15528 508 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 DCUN1D2Q6PH85 259 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 GPBP1Q86WP2 473 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 ZSWIM6Q9HCJ5 1215 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 TTC37Q6PGP7 1564 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 OR52Z1P0C646 297 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 SPICE1Q8N0Z3 855 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 ADPGKQ9BRR6 497 aa20.58■□□□□ 0.89
PCDH1-201ENST00000287008 ERCC3P19447 782 aa20.58■□□□□ 0.88
PCDH1-201ENST00000287008 DPP9Q86TI2 863 aa20.58■□□□□ 0.88
PCDH1-201ENST00000287008 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.88
PCDH1-201ENST00000287008 CCDC63Q8NA47 563 aa20.58■□□□□ 0.88
PCDH1-201ENST00000287008 DHX36Q9H2U1 1008 aaKnown RBP20.58■□□□□ 0.88
PCDH1-201ENST00000287008 GAS8O95995 478 aa20.58■□□□□ 0.88
PCDH1-201ENST00000287008 NLRP12P59046 1061 aa20.58■□□□□ 0.88
PCDH1-201ENST00000287008 CCDC25Q86WR0 208 aa20.58■□□□□ 0.88
PCDH1-201ENST00000287008 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.88
PCDH1-201ENST00000287008 DAPK3O43293 454 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 PRPF6O94906 941 aaKnown RBP20.57■□□□□ 0.88
PCDH1-201ENST00000287008 USP14P54578 494 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 CIAPIN1Q6FI81 312 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 RNF169Q8NCN4 708 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 TAB2Q9NYJ8 693 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 TUBBP07437 444 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 RDH13Q8NBN7 331 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 SUGCTQ9HAC7 445 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 BTBD18B2RXH4 712 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 OPA1O60313 960 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 ASPRV1Q53RT3 343 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 TEKT3Q9BXF9 490 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 FAM204AQ9H8W3 233 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 P4HA1P13674 534 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 TECP42680 631 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 POLA2Q14181 598 aa20.57■□□□□ 0.88
PCDH1-201ENST00000287008 ADALQ6DHV7 355 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms