RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ANO1Q5XXA6 986 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 SHISA4Q96DD7 197 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 HLA-DOAP06340 250 aa24.22■■□□□ 1.47
YBX3-202ENST00000279550 CDK8P49336 464 aa24.22■■□□□ 1.47
YBX3-202ENST00000279550 TFAP4Q01664 338 aa24.22■■□□□ 1.47
YBX3-202ENST00000279550 GABPAQ06546 454 aa24.22■■□□□ 1.47
YBX3-202ENST00000279550 TNMDQ9H2S6 317 aa24.22■■□□□ 1.47
YBX3-202ENST00000279550 PPP2R5BQ15173 497 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 FKBP1CQ5VVH2 108 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 RBM43Q6ZSC3 357 aaKnown RBP24.21■■□□□ 1.47
YBX3-202ENST00000279550 SAMD7Q7Z3H4 446 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 CKAP2LQ8IYA6 745 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 FSIP1Q8NA03 581 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 IL17RBQ9NRM6 502 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 SERPINB13Q9UIV8 391 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 ATRNL1Q5VV63 1379 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 DDTLA6NHG4 134 aaPredicted RBP24.21■■□□□ 1.47
YBX3-202ENST00000279550 TCP10L2B9ZVM9 353 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 MMP1P03956 469 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 CALM1P0DP23 149 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 CALM2P0DP24 149 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 CALM3P0DP25 149 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 PKN1Q16512 942 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 RBM26Q5T8P6 1007 aaKnown RBP24.21■■□□□ 1.47
YBX3-202ENST00000279550 SH3BP5LQ7L8J4 393 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 ZSCAN29Q8IWY8 852 aaPredicted RBP24.21■■□□□ 1.47
YBX3-202ENST00000279550 ENGASEQ8NFI3 743 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 RNF26Q9BY78 433 aaPredicted RBP24.21■■□□□ 1.47
YBX3-202ENST00000279550 GPRC5DQ9NZD1 345 aa24.21■■□□□ 1.47
YBX3-202ENST00000279550 MYH6P13533 1939 aa24.2■■□□□ 1.47
YBX3-202ENST00000279550 COL2A1P02458 1487 aaPredicted RBP24.2■■□□□ 1.46
YBX3-202ENST00000279550 H7C1D1 291 aa24.2■■□□□ 1.46
YBX3-202ENST00000279550 SPTLC2O15270 562 aa24.2■■□□□ 1.46
YBX3-202ENST00000279550 SNW1Q13573 536 aaKnown RBP24.2■■□□□ 1.46
YBX3-202ENST00000279550 GNL2Q13823 731 aaKnown RBP24.2■■□□□ 1.46
YBX3-202ENST00000279550 TMTC3Q6ZXV5 915 aa24.2■■□□□ 1.46
YBX3-202ENST00000279550 EHD4Q9H223 541 aa24.2■■□□□ 1.46
YBX3-202ENST00000279550 VEZTQ9HBM0 779 aa24.2■■□□□ 1.46
YBX3-202ENST00000279550 RBM28Q9NW13 759 aaKnown RBP24.2■■□□□ 1.46
YBX3-202ENST00000279550 hCG_1642624A0A1W2PR95 340 aa24.19■■□□□ 1.46
YBX3-202ENST00000279550 RASA1P20936 1047 aa24.19■■□□□ 1.46
YBX3-202ENST00000279550 TBC1D10BQ4KMP7 808 aaPredicted RBP24.19■■□□□ 1.46
YBX3-202ENST00000279550 ZNF444Q8N0Y2 327 aaPredicted RBP24.19■■□□□ 1.46
YBX3-202ENST00000279550 KCNG4Q8TDN1 519 aa24.19■■□□□ 1.46
YBX3-202ENST00000279550 ANP32BQ92688 251 aaKnown RBP24.19■■□□□ 1.46
YBX3-202ENST00000279550 PI4KBQ9UBF8 816 aa24.19■■□□□ 1.46
YBX3-202ENST00000279550 BTBD18B2RXH4 712 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 DDNO94850 711 aaPredicted RBP24.18■■□□□ 1.46
YBX3-202ENST00000279550 KIF4BQ2VIQ3 1234 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 DIS3L2Q8IYB7 885 aaKnown RBP24.18■■□□□ 1.46
YBX3-202ENST00000279550 PDLIM2Q96JY6 352 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 SWAP70Q9UH65 585 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 CNTNAP5Q8WYK1 1306 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 CNTNAP1P78357 1384 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 PRPF3O43395 683 aaKnown RBP24.18■■□□□ 1.46
YBX3-202ENST00000279550 SF3A1Q15459 793 aaKnown RBP24.18■■□□□ 1.46
YBX3-202ENST00000279550 ADALQ6DHV7 355 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 CCDC73Q6ZRK6 1079 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 FAM151AQ8WW52 585 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 MAP3K14Q99558 947 aa24.18■■□□□ 1.46
YBX3-202ENST00000279550 A0A1W2PQ27 194 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 A0A1W2PQ64 194 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 A0A1W2PQD8 194 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 CCDC192P0DO97 292 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 FAM160A1Q05DH4 1040 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 TYRO3Q06418 890 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 SLC39A14Q15043 492 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 PTPAQ15257 358 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 AXDND1Q5T1B0 1012 aaPredicted RBP24.17■■□□□ 1.46
YBX3-202ENST00000279550 FAM83AQ86UY5 434 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 SRBD1Q8N5C6 995 aaKnown RBP24.17■■□□□ 1.46
YBX3-202ENST00000279550 OXER1Q8TDS5 423 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 MRPS27Q92552 414 aaKnown RBP24.17■■□□□ 1.46
YBX3-202ENST00000279550 ANKS1AQ92625 1134 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 MRVI1Q9Y6F6 885 aa24.17■■□□□ 1.46
YBX3-202ENST00000279550 V9GY48 417 aaPredicted RBP24.17■■□□□ 1.46
YBX3-202ENST00000279550 TSPY3P0CV98 308 aa24.16■■□□□ 1.46
YBX3-202ENST00000279550 TSPY8P0CW00 308 aa24.16■■□□□ 1.46
YBX3-202ENST00000279550 NOSTRINQ8IVI9 506 aa24.16■■□□□ 1.46
YBX3-202ENST00000279550 UVSSAQ2YD98 709 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 FMR1NBQ8N0W7 255 aaPredicted RBP24.15■■□□□ 1.46
YBX3-202ENST00000279550 CTCFLQ8NI51 663 aaPredicted RBP24.15■■□□□ 1.46
YBX3-202ENST00000279550 CSRNP1Q96S65 589 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 DNAJC18Q9H819 358 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 RTN4Q9NQC3 1192 aaKnown RBP24.15■■□□□ 1.46
YBX3-202ENST00000279550 VPS54Q9P1Q0 977 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 SIPA1L1O43166 1804 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 A0A1B0GVL5 298 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 MARCKSP29966 332 aaPredicted RBP24.15■■□□□ 1.46
YBX3-202ENST00000279550 SHMT1P34896 483 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 EPS15P42566 896 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 AKAP17AQ02040 695 aaKnown RBP24.15■■□□□ 1.46
YBX3-202ENST00000279550 NR5A1Q13285 461 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 SAFBQ15424 915 aaKnown RBP eCLIP24.15■■□□□ 1.46
YBX3-202ENST00000279550 METTL16Q86W50 562 aaKnown RBP24.15■■□□□ 1.46
YBX3-202ENST00000279550 DGKHQ86XP1 1220 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 KAT14Q9H8E8 782 aa24.15■■□□□ 1.46
YBX3-202ENST00000279550 ZC3H4Q9UPT8 1303 aaKnown RBP24.15■■□□□ 1.46
YBX3-202ENST00000279550 TOB1P50616 345 aaPredicted RBP24.14■■□□□ 1.45
YBX3-202ENST00000279550 DPY19L2Q6NUT2 758 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms