RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SH3GLB2Q9NR46 395 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 CCDC39Q9UFE4 941 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 FBXO2Q9UK22 296 aaPredicted RBP11.02□□□□□ -0.65
TRIM55-201ENST00000276573 CEP131Q9UPN4 1083 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 MORC2Q9Y6X9 1032 aaPredicted RBP11.02□□□□□ -0.65
TRIM55-201ENST00000276573 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
TRIM55-201ENST00000276573 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 NLRP5P59047 1200 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 EARS2Q5JPH6 523 aaKnown RBP11.01□□□□□ -0.65
TRIM55-201ENST00000276573 PIBF1Q8WXW3 757 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 PDGFDQ9GZP0 370 aaPredicted RBP11.01□□□□□ -0.65
TRIM55-201ENST00000276573 OSBPL5Q9H0X9 879 aaPredicted RBP11.01□□□□□ -0.65
TRIM55-201ENST00000276573 ANO10Q9NW15 660 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 SRPRBQ9Y5M8 271 aaKnown RBP11.01□□□□□ -0.65
TRIM55-201ENST00000276573 FOCADQ5VW36 1801 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 TRIM75PA6NK02 468 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 BAG6P46379 1132 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 KIAA2012Q0VF49 1180 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
TRIM55-201ENST00000276573 IQCB1Q15051 598 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 SLC35G1Q2M3R5 365 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 ZSCAN30Q86W11 494 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
TRIM55-201ENST00000276573 SUPT20HQ8NEM7 779 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
TRIM55-201ENST00000276573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
TRIM55-201ENST00000276573 KLRF2D3W0D1 207 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 CYTH3O43739 400 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 CALML3P27482 149 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 PLCB2Q00722 1185 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 AOC3Q16853 763 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 KIAA0825Q8IV33 1275 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 ERCC4Q92889 916 aaPredicted RBP11□□□□□ -0.65
TRIM55-201ENST00000276573 SERPINB13Q9UIV8 391 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 NOL7Q9UMY1 257 aaKnown RBP11□□□□□ -0.65
TRIM55-201ENST00000276573 MTMR7Q9Y216 660 aa11□□□□□ -0.65
TRIM55-201ENST00000276573 IGKV6D-41A0A0C4DH26 115 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 PARP1P09874 1014 aaKnown RBP10.99□□□□□ -0.65
TRIM55-201ENST00000276573 SMARCA1P28370 1054 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 GRIN1Q05586 938 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 NOM1Q5C9Z4 860 aaKnown RBP10.99□□□□□ -0.65
TRIM55-201ENST00000276573 C11orf57Q6ZUT1 292 aaPredicted RBP10.99□□□□□ -0.65
TRIM55-201ENST00000276573 SPZ1Q9BXG8 430 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 KCNH3Q9ULD8 1083 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 MYO3BQ8WXR4 1341 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 C21orf2O43822 256 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 BMP15O95972 392 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
TRIM55-201ENST00000276573 GOLGA8HP0CJ92 632 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 AKR1B1P15121 316 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 CLCN1P35523 988 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 NFIAQ12857 509 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 LONRF3Q496Y0 759 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 GRIPAP1Q4V328 841 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 SPECC1Q5M775 1068 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 ZFPM1Q8IX07 1006 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 ELOA2Q8IYF1 753 aaPredicted RBP10.99□□□□□ -0.65
TRIM55-201ENST00000276573 BLIDQ8IZY5 108 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 SLC16A10Q8TF71 515 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 FAM13BQ9NYF5 915 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 PCDHAC2Q9Y5I4 1007 aa10.99□□□□□ -0.65
TRIM55-201ENST00000276573 PLIN4Q96Q06 1357 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 A0A087WWV3 80 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 ADAMTS3O15072 1205 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 SHMT1P34896 483 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 TRAPPC10P48553 1259 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 RBM5P52756 815 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRIM55-201ENST00000276573 NLRP12P59046 1061 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 ZNF174Q15697 407 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 TTC38Q5R3I4 469 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 KRBA2Q6ZNG9 492 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 FAM177A1Q8N128 213 aaPredicted RBP10.98□□□□□ -0.65
TRIM55-201ENST00000276573 TTLL6Q8N841 843 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 FBXO41Q8TF61 875 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 GPKOWQ92917 476 aaPredicted RBP eCLIP10.98□□□□□ -0.65
TRIM55-201ENST00000276573 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 EHD4Q9H223 541 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
TRIM55-201ENST00000276573 TUBE1Q9UJT0 475 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 SERPINA10Q9UK55 444 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 PCDHA4Q9UN74 947 aa10.98□□□□□ -0.65
TRIM55-201ENST00000276573 USP17L5A8MUK1 530 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 M0R2N6 131 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 STXBP3O00186 592 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 WNT7AO00755 349 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
TRIM55-201ENST00000276573 WWC2Q6AWC2 1192 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 GALNT17Q6IS24 598 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 TYW1BQ6NUM6 668 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 PIK3AP1Q6ZUJ8 805 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 CSRNP2Q9H175 543 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 DHX36Q9H2U1 1008 aaKnown RBP10.97□□□□□ -0.65
TRIM55-201ENST00000276573 BARHL2Q9NY43 387 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms