RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 TBC1D8BQ0IIM8 1120 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 BARGINQ6ZT62 677 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 AK9Q5TCS8 1911 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 CDC27P30260 824 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 BMS1Q14692 1282 aaKnown RBP16.15■□□□□ 0.18
TMEM47-201ENST00000275954 AOC3Q16853 763 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 DYNLL2Q96FJ2 89 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 ZNF215Q9UL58 517 aaPredicted RBP16.15■□□□□ 0.18
TMEM47-201ENST00000275954 OVOS2A0A0G2JMS6 1433 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 NEDD4P46934 1319 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 KRT9P35527 623 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 FCHSD1Q86WN1 690 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 PDLIM2Q96JY6 352 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 NCOA3Q9Y6Q9 1424 aa16.15■□□□□ 0.18
TMEM47-201ENST00000275954 MRFAP1L1Q96HT8 127 aa16.14■□□□□ 0.18
TMEM47-201ENST00000275954 PDGFDQ9GZP0 370 aaPredicted RBP16.14■□□□□ 0.18
TMEM47-201ENST00000275954 USP40Q9NVE5 1235 aa16.14■□□□□ 0.18
TMEM47-201ENST00000275954 RIPOR2Q9Y4F9 1068 aa16.14■□□□□ 0.18
TMEM47-201ENST00000275954 NEURL4Q96JN8 1562 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 FAM170AA1A519 330 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 FAM114A1Q8IWE2 563 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 FBXO41Q8TF61 875 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
TMEM47-201ENST00000275954 SPAG5Q96R06 1193 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 ARFGAP3Q9NP61 516 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
TMEM47-201ENST00000275954 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
TMEM47-201ENST00000275954 PAFAH1B1P43034 410 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 EVCP57679 992 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
TMEM47-201ENST00000275954 MIGA2Q7L4E1 593 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 CSGALNACT2Q8N6G5 542 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 PPP1R12BO60237 982 aaPredicted RBP16.14■□□□□ 0.17
TMEM47-201ENST00000275954 PHACTR2O75167 634 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 IFNAR1P17181 557 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 DLGAP5Q15398 846 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 KRT222Q8N1A0 295 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 SYMPKQ92797 1274 aaKnown RBP16.14■□□□□ 0.17
TMEM47-201ENST00000275954 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 CCDC42Q96M95 316 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 TBC1D7Q9P0N9 293 aa16.14■□□□□ 0.17
TMEM47-201ENST00000275954 TMCO5BA8MYB1 307 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 CAMTA2O94983 1202 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 SCG2P13521 617 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 CASP1P29466 404 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 MB21D2Q8IYB1 491 aaPredicted RBP16.13■□□□□ 0.17
TMEM47-201ENST00000275954 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
TMEM47-201ENST00000275954 KLRF2D3W0D1 207 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 PAK1Q13153 545 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 MINPP1Q9UNW1 487 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 FRMPD2Q68DX3 1309 aaPredicted RBP16.13■□□□□ 0.17
TMEM47-201ENST00000275954 CYP2D6P10635 497 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 CYLC1P35663 651 aaPredicted RBP16.13■□□□□ 0.17
TMEM47-201ENST00000275954 SMARCC2Q8TAQ2 1214 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 EPSTI1Q96J88 318 aa16.13■□□□□ 0.17
TMEM47-201ENST00000275954 CCDC94Q9BW85 323 aaPredicted RBP16.13■□□□□ 0.17
TMEM47-201ENST00000275954 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.13■□□□□ 0.17
TMEM47-201ENST00000275954 CTAGE15A4D2H0 777 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 CTAGE9A4FU28 777 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 PLEKHA8P1O95397 391 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 CTAGE8P0CG41 777 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 CTAGE6Q86UF2 777 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 CTAGE4Q8IX94 777 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 ADGRB2O60241 1585 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 SMCO2A6NFE2 343 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 SP4Q02446 784 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 PPP2R5BQ15173 497 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 ERCC6LQ2NKX8 1250 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 SPECC1LQ69YQ0 1117 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 BLIDQ8IZY5 108 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 FERMT2Q96AC1 680 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 CPVLQ9H3G5 476 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 PKD2L1Q9P0L9 805 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 MACROD2A1Z1Q3 448 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 NMT2O60551 498 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 COL5A2P05997 1499 aaPredicted RBP16.12■□□□□ 0.17
TMEM47-201ENST00000275954 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
TMEM47-201ENST00000275954 NONOQ15233 471 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM47-201ENST00000275954 SLC15A2Q16348 729 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 SLF1Q9BQI6 1058 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 IMPACTQ9P2X3 320 aa16.12■□□□□ 0.17
TMEM47-201ENST00000275954 ARPP21Q9UBL0 812 aaPredicted RBP16.12■□□□□ 0.17
TMEM47-201ENST00000275954 TRAF5O00463 557 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 FMNL1O95466 1100 aaPredicted RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 CNGA4Q8IV77 575 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 SYCP3Q8IZU3 236 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 EXOSC10Q01780 885 aaKnown RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 TRIM28Q13263 835 aaKnown RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 PRPF4BQ13523 1007 aaKnown RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 TSGA10IPQ3SY00 556 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 IQCEQ6IPM2 695 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 NELFBQ8WX92 580 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms