RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 KDM7AQ6ZMT4 941 aa10.32□□□□□ -0.76
PDGFC-201ENST00000274071 SUN2Q9UH99 717 aa10.32□□□□□ -0.76
PDGFC-201ENST00000274071 E7EVH7 732 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 DNAJC8O75937 253 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-201ENST00000274071 SFSWAPQ12872 951 aaKnown RBP10.31□□□□□ -0.76
PDGFC-201ENST00000274071 MPP3Q13368 585 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 NFE2L2Q16236 605 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 LACTB2Q53H82 288 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-201ENST00000274071 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 ADALQ6DHV7 355 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 RASGRP2Q7LDG7 609 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 ANKLE2Q86XL3 938 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 ARL10Q8N8L6 244 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 SIL1Q9H173 461 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 IL1RAPL2Q9NP60 686 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 NOP53Q9NZM5 478 aaKnown RBP10.31□□□□□ -0.76
PDGFC-201ENST00000274071 AOX1Q06278 1338 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 PNMA6EA0A0J9YXQ4 647 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 ZKSCAN1P17029 563 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-201ENST00000274071 TOB2Q14106 344 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-201ENST00000274071 POLA2Q14181 598 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 PPP1R7Q15435 360 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 TAX1BP1Q86VP1 789 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 TEKT4Q8WW24 435 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 CNKSR1Q969H4 720 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 WDR35Q9P2L0 1181 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 C2CD2Q9Y426 696 aa10.31□□□□□ -0.76
PDGFC-201ENST00000274071 NRKQ7Z2Y5 1582 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 RGPD8O14715 1765 aaPredicted RBP10.3□□□□□ -0.76
PDGFC-201ENST00000274071 APBA1Q02410 837 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 RIPK1Q13546 671 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 EMC10Q5UCC4 262 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 SFMBT2Q5VUG0 894 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 PI4K2BQ8TCG2 481 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 AGAP11Q8TF27 550 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 OSBPL1AQ9BXW6 950 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 GOLGA6L10A6NI86 522 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 STXBP3O00186 592 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 KRT14P02533 472 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 MDH1P40925 334 aaKnown RBP10.3□□□□□ -0.76
PDGFC-201ENST00000274071 ATL3Q6DD88 541 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 CCHCR1Q8TD31 782 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 OVOS2A0A0J9YW53 1432 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 OVOS2Q6IE36 1432 aa10.3□□□□□ -0.76
PDGFC-201ENST00000274071 GPR75-ASB3A0A0A6YYF3 556 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 SPDYE5A6NIY4 337 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 ZNF24P17028 368 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 ANKRD1Q15327 319 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 NBPF14Q5TI25 921 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 TRAPPC11Q7Z392 1133 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 TSEN2Q8NCE0 465 aaKnown RBP10.29□□□□□ -0.76
PDGFC-201ENST00000274071 PANK4Q9NVE7 773 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 HDAC6Q9UBN7 1215 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 ZNF510Q9Y2H8 683 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 LEMD3Q9Y2U8 911 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 ASB3Q9Y575 518 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 XRN1Q8IZH2 1706 aaKnown RBP10.29□□□□□ -0.76
PDGFC-201ENST00000274071 RASSF10A6NK89 507 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 PDLIM1O00151 329 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 PPIP5K2O43314 1243 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 CLTAP09496 248 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 GNAQP50148 359 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 CCDC15Q0P6D6 951 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 EIF4A2Q14240 407 aaKnown RBP10.29□□□□□ -0.76
PDGFC-201ENST00000274071 ALS2CLQ60I27 953 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 PANX2Q96RD6 677 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 MTRQ99707 1265 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 PPANQ9NQ55 473 aaKnown RBP10.29□□□□□ -0.76
PDGFC-201ENST00000274071 A0A1W2PQ27 194 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 A0A1W2PQ64 194 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 A0A1W2PQD8 194 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 AKR1B15C9JRZ8 316 aaPredicted RBP10.29□□□□□ -0.76
PDGFC-201ENST00000274071 SRGAP2O75044 1071 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 GNAI2P04899 355 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
PDGFC-201ENST00000274071 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 HVCN1Q96D96 273 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 RUFY1Q96T51 708 aa10.29□□□□□ -0.76
PDGFC-201ENST00000274071 MAP3K5Q99683 1374 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 ENC1O14682 589 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 CNGA1P29973 690 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 FOSBP53539 338 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 INHBCP55103 352 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 MXRA7P84157 204 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 QPCTQ16769 361 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 ARMC9Q7Z3E5 817 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 DZIP3Q86Y13 1208 aaKnown RBP10.28□□□□□ -0.76
PDGFC-201ENST00000274071 CCT6BQ92526 530 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 TRIM7Q9C029 511 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 N4BP3O15049 544 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 CREB3O43889 395 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 LGR5O75473 907 aa10.28□□□□□ -0.76
PDGFC-201ENST00000274071 LUC7L3O95232 432 aaKnown RBP10.28□□□□□ -0.76
PDGFC-201ENST00000274071 NR1D1P20393 614 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms