RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
CPNE9-201ENST00000273027 MBD4O95243 580 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 GPTP24298 496 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 CDC27P30260 824 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 MAP2K2P36507 400 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 EPS15P42566 896 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 TDO2P48775 406 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 EIF6P56537 245 aaKnown RBP11.53□□□□□ -0.56
CPNE9-201ENST00000273027 DGKZQ13574 1117 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 TUBB2AQ13885 445 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 TMC6Q7Z403 805 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 CRACR2BQ8N4Y2 399 aaPredicted RBP11.53□□□□□ -0.56
CPNE9-201ENST00000273027 MAGEB6Q8N7X4 407 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 ZNF397Q8NF99 534 aaPredicted RBP11.53□□□□□ -0.56
CPNE9-201ENST00000273027 FERMT2Q96AC1 680 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 TUBB2BQ9BVA1 445 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
CPNE9-201ENST00000273027 A0A1B0GUL6 1792 aa11.53□□□□□ -0.56
CPNE9-201ENST00000273027 ARHGAP6O43182 974 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 PRPF3O43395 683 aaKnown RBP11.52□□□□□ -0.57
CPNE9-201ENST00000273027 STX10O60499 249 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 SERPINC1P01008 464 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 FGRP09769 529 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 SARSP49591 514 aaKnown RBP11.52□□□□□ -0.57
CPNE9-201ENST00000273027 NCBP1Q09161 790 aaKnown RBP11.52□□□□□ -0.57
CPNE9-201ENST00000273027 CCDC178Q5BJE1 867 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 SHC4Q6S5L8 630 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 MICU3Q86XE3 530 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 FANCBQ8NB91 859 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 CTAGE1Q96RT6 745 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 NAA15Q9BXJ9 866 aaKnown RBP11.52□□□□□ -0.57
CPNE9-201ENST00000273027 SLC26A6Q9BXS9 759 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 TMX1Q9H3N1 280 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
CPNE9-201ENST00000273027 AATFQ9NY61 560 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPNE9-201ENST00000273027 DENND2AQ9ULE3 1009 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 SLC4A4Q9Y6R1 1079 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 ZNF804BA4D1E1 1349 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.57
CPNE9-201ENST00000273027 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
CPNE9-201ENST00000273027 ATP8B1O43520 1251 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 DDAH1O94760 285 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 TOP1P11387 765 aaKnown RBP11.51□□□□□ -0.57
CPNE9-201ENST00000273027 ALDH1B1P30837 517 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 TRAPPC10P48553 1259 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 ETF1P62495 437 aaKnown RBP11.51□□□□□ -0.57
CPNE9-201ENST00000273027 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
CPNE9-201ENST00000273027 RASGRF1Q13972 1273 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 POSTNQ15063 836 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
CPNE9-201ENST00000273027 CAVIN4Q5BKX8 364 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 OTUD7BQ6GQQ9 843 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 PI16Q6UXB8 463 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 IQCA1Q86XH1 822 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 CERS3Q8IU89 383 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 DIS3L2Q8IYB7 885 aaKnown RBP11.51□□□□□ -0.57
CPNE9-201ENST00000273027 ZNF654Q8IZM8 581 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 SMARCE1Q969G3 411 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 EPB41L4AQ9HCS5 686 aaPredicted RBP11.51□□□□□ -0.57
CPNE9-201ENST00000273027 LRP2BPQ9P2M1 347 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 TLL2Q9Y6L7 1015 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 ADAMTSL1Q8N6G6 1762 aa11.51□□□□□ -0.57
CPNE9-201ENST00000273027 LAMB1P07942 1786 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 KLRG2A4D1S0 409 aaPredicted RBP11.5□□□□□ -0.57
CPNE9-201ENST00000273027 CA12O43570 354 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
CPNE9-201ENST00000273027 MARCKSP29966 332 aaPredicted RBP11.5□□□□□ -0.57
CPNE9-201ENST00000273027 GABPB1Q06547 395 aaPredicted RBP11.5□□□□□ -0.57
CPNE9-201ENST00000273027 PPARAQ07869 468 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 E4F1Q66K89 784 aaPredicted RBP11.5□□□□□ -0.57
CPNE9-201ENST00000273027 CATIPQ7Z7H3 387 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 CCDC85AQ96PX6 553 aaPredicted RBP11.5□□□□□ -0.57
CPNE9-201ENST00000273027 GSDMAQ96QA5 445 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 FBXO2Q9UK22 296 aaPredicted RBP11.5□□□□□ -0.57
CPNE9-201ENST00000273027 PCDHA5Q9Y5H7 936 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 DUOX1Q9NRD9 1551 aa11.5□□□□□ -0.57
CPNE9-201ENST00000273027 MYH2Q9UKX2 1941 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 MYH13Q9UKX3 1938 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 MAGEB6P1A0A0J9YX57 407 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 KIF20AO95235 890 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 CELF2O95319 508 aaKnown RBP11.49□□□□□ -0.57
CPNE9-201ENST00000273027 NTSR2O95665 410 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
CPNE9-201ENST00000273027 KRT2P35908 639 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 MORC3Q14149 939 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 SEC23AQ15436 765 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 CFAP100Q494V2 611 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
CPNE9-201ENST00000273027 METTL16Q86W50 562 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms