RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 MGAMO43451 1857 aa28.89■■■□□ 2.21
SSBP4-201ENST00000270061 USP17L10C9JJH3 530 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 ZNF213O14771 459 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 CYP2D6P10635 497 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 ABCB5Q2M3G0 1257 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 SMCR8Q8TEV9 937 aaPredicted RBP28.88■■■□□ 2.21
SSBP4-201ENST00000270061 CABP5Q9NP86 173 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 PNMA3Q9UL41 463 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 PTPN22Q9Y2R2 807 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 EXOSC10Q01780 885 aaKnown RBP28.88■■■□□ 2.21
SSBP4-201ENST00000270061 PABPC4Q13310 644 aaKnown RBP eCLIP28.88■■■□□ 2.211e-6■■■■□ 22.3
SSBP4-201ENST00000270061 TOB2Q14106 344 aaPredicted RBP28.88■■■□□ 2.21
SSBP4-201ENST00000270061 TMOD4Q9NZQ9 345 aa28.88■■■□□ 2.21
SSBP4-201ENST00000270061 C19orf81C9J6K1 198 aa28.87■■■□□ 2.21
SSBP4-201ENST00000270061 TAOK2Q9UL54 1235 aa28.87■■■□□ 2.21
SSBP4-201ENST00000270061 USP17L12C9JPN9 530 aa28.86■■■□□ 2.21
SSBP4-201ENST00000270061 USP17L21D6R901 530 aa28.86■■■□□ 2.21
SSBP4-201ENST00000270061 BCRP11274 1271 aa28.86■■■□□ 2.21
SSBP4-201ENST00000270061 ARHGAP39Q9C0H5 1083 aa28.86■■■□□ 2.21
SSBP4-201ENST00000270061 SWAP70Q9UH65 585 aa28.86■■■□□ 2.21
SSBP4-201ENST00000270061 TPCN1Q9ULQ1 816 aa28.86■■■□□ 2.21
SSBP4-201ENST00000270061 GSG1L2A8MUP6 293 aa28.85■■■□□ 2.21
SSBP4-201ENST00000270061 APPP05067 770 aa28.85■■■□□ 2.21
SSBP4-201ENST00000270061 C12orf60Q5U649 245 aa28.85■■■□□ 2.21
SSBP4-201ENST00000270061 IFNL3Q8IZI9 196 aa28.85■■■□□ 2.21
SSBP4-201ENST00000270061 FBXL16Q8N461 479 aa28.85■■■□□ 2.21
SSBP4-201ENST00000270061 AGXT2Q9BYV1 514 aa28.85■■■□□ 2.21
SSBP4-201ENST00000270061 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.85■■■□□ 2.21
SSBP4-201ENST00000270061 ECM2O94769 699 aaPredicted RBP28.84■■■□□ 2.21
SSBP4-201ENST00000270061 GNRH1P01148 92 aa28.84■■■□□ 2.21
SSBP4-201ENST00000270061 ME3Q16798 604 aa28.84■■■□□ 2.21
SSBP4-201ENST00000270061 SLC44A5Q8NCS7 719 aa28.84■■■□□ 2.21
SSBP4-201ENST00000270061 DYNLL2Q96FJ2 89 aa28.84■■■□□ 2.21
SSBP4-201ENST00000270061 LARP6Q9BRS8 491 aaKnown RBP28.84■■■□□ 2.21
SSBP4-201ENST00000270061 NACAP1Q9BZK3 213 aa28.84■■■□□ 2.21
SSBP4-201ENST00000270061 CYP2D7A0A087X1C5 515 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 LARGE1O95461 756 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 Q6ZUG5 572 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 TCEANC2Q96MN5 208 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 EPB41L4AQ9HCS5 686 aaPredicted RBP28.83■■■□□ 2.21
SSBP4-201ENST00000270061 MPHOSPH10O00566 681 aaKnown RBP28.83■■■□□ 2.21
SSBP4-201ENST00000270061 OSBPP22059 807 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 PSMC4P43686 418 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 HAND2P61296 217 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 CTR9Q6PD62 1173 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 TNPO1Q92973 898 aaKnown RBP28.83■■■□□ 2.21
SSBP4-201ENST00000270061 FEZ1Q99689 392 aa28.83■■■□□ 2.21
SSBP4-201ENST00000270061 ARPP21Q9UBL0 812 aaPredicted RBP28.83■■■□□ 2.21
SSBP4-201ENST00000270061 GIMAP6Q6P9H5 292 aa28.82■■■□□ 2.2
SSBP4-201ENST00000270061 NAPBQ9H115 298 aa28.82■■■□□ 2.2
SSBP4-201ENST00000270061 USP17L2Q6R6M4 530 aa28.81■■■□□ 2.2
SSBP4-201ENST00000270061 NCOA7Q8NI08 942 aa28.81■■■□□ 2.2
SSBP4-201ENST00000270061 ASCC2Q9H1I8 757 aaPredicted RBP28.81■■■□□ 2.2
SSBP4-201ENST00000270061 BRCA2P51587 3418 aa28.81■■■□□ 2.2
SSBP4-201ENST00000270061 DOCK3Q8IZD9 2030 aa28.81■■■□□ 2.2
SSBP4-201ENST00000270061 WDR19Q8NEZ3 1342 aa28.81■■■□□ 2.2
SSBP4-201ENST00000270061 FMNL1O95466 1100 aaPredicted RBP28.8■■■□□ 2.2
SSBP4-201ENST00000270061 CTGFP29279 349 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 CLEC17AQ6ZS10 378 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 TRIM47Q96LD4 638 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 NBPF3Q9H094 633 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 HOXA7P31268 230 aaPredicted RBP28.8■■■□□ 2.2
SSBP4-201ENST00000270061 GUCY1A2P33402 732 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 SEPT2Q15019 361 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 C16orf86Q6ZW13 317 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 MB21D2Q8IYB1 491 aaPredicted RBP28.8■■■□□ 2.2
SSBP4-201ENST00000270061 EMILIN3Q9NT22 766 aa28.8■■■□□ 2.2
SSBP4-201ENST00000270061 KIAA0100Q14667 2235 aaKnown RBP28.8■■■□□ 2.2
SSBP4-201ENST00000270061 SMIM22K7EJ46 135 aa28.79■■■□□ 2.2
SSBP4-201ENST00000270061 CDK8P49336 464 aa28.79■■■□□ 2.2
SSBP4-201ENST00000270061 USP14P54578 494 aa28.79■■■□□ 2.2
SSBP4-201ENST00000270061 IRX3P78415 501 aaPredicted RBP28.79■■■□□ 2.2
SSBP4-201ENST00000270061 ANKRD13CQ8N6S4 541 aa28.79■■■□□ 2.2
SSBP4-201ENST00000270061 PTCH2Q9Y6C5 1203 aa28.79■■■□□ 2.2
SSBP4-201ENST00000270061 GCLCP48506 637 aaPredicted RBP28.78■■■□□ 2.2
SSBP4-201ENST00000270061 PRMT2P55345 433 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 SOX10P56693 466 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 ZYXQ15942 572 aaKnown RBP28.78■■■□□ 2.2
SSBP4-201ENST00000270061 SBK1Q52WX2 424 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 TMEM179Q6ZVK1 233 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 HOXD10P28358 340 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 MCM5P33992 734 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 FCGRTP55899 365 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 ST3GAL1Q11201 340 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 CCDC83Q8IWF9 413 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 ACER1Q8TDN7 264 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 KIAA1683Q9H0B3 1180 aa28.78■■■□□ 2.2
SSBP4-201ENST00000270061 FAM110CQ1W6H9 321 aa28.77■■■□□ 2.2
SSBP4-201ENST00000270061 RALYLQ86SE5 291 aaKnown RBP28.77■■■□□ 2.2
SSBP4-201ENST00000270061 C12orf42Q96LP6 360 aa28.77■■■□□ 2.2
SSBP4-201ENST00000270061 CCDC17Q96LX7 622 aa28.77■■■□□ 2.2
SSBP4-201ENST00000270061 TDO2P48775 406 aa28.76■■■□□ 2.19
SSBP4-201ENST00000270061 TRDNQ13061 729 aa28.76■■■□□ 2.19
SSBP4-201ENST00000270061 TBC1D10CQ8IV04 446 aa28.76■■■□□ 2.19
SSBP4-201ENST00000270061 SRRDQ9UH36 339 aa28.76■■■□□ 2.19
SSBP4-201ENST00000270061 SMC3Q9UQE7 1217 aa28.76■■■□□ 2.19
SSBP4-201ENST00000270061 MINDY4BA8MYZ0 360 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 AKR1B1P15121 316 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 MCM4P33991 863 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 RGS19P49795 217 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms