RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 KIAA2012Q0VF49 1180 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 KRI1Q8N9T8 703 aaKnown RBP19.12■□□□□ 0.65
CCDC40-201ENST00000269318 CEP95Q96GE4 821 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 CLIC6Q96NY7 704 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 OSBPL5Q9H0X9 879 aaPredicted RBP19.12■□□□□ 0.65
CCDC40-201ENST00000269318 ESPNB1AK53 854 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 AP5Z1O43299 807 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 HDLBPQ00341 1268 aaKnown RBP19.12■□□□□ 0.65
CCDC40-201ENST00000269318 LUZP1Q86V48 1076 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 TIGD1Q96MW7 591 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 SDF4Q9BRK5 362 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 DNAJC25Q9H1X3 360 aa19.12■□□□□ 0.65
CCDC40-201ENST00000269318 FBXO2Q9UK22 296 aaPredicted RBP19.12■□□□□ 0.65
CCDC40-201ENST00000269318 CYTH3O43739 400 aa19.11■□□□□ 0.65
CCDC40-201ENST00000269318 PTPREP23469 700 aa19.11■□□□□ 0.65
CCDC40-201ENST00000269318 STX1AQ16623 288 aa19.11■□□□□ 0.65
CCDC40-201ENST00000269318 AOC3Q16853 763 aa19.11■□□□□ 0.65
CCDC40-201ENST00000269318 BRMS1Q9HCU9 246 aa19.11■□□□□ 0.65
CCDC40-201ENST00000269318 ADCY5O95622 1261 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 TOP1P11387 765 aaKnown RBP19.1■□□□□ 0.65
CCDC40-201ENST00000269318 KIAA0825Q8IV33 1275 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 SH3GLB2Q9NR46 395 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 MYO3BQ8WXR4 1341 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 IGKV6D-41A0A0C4DH26 115 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 SYKP43405 635 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 ZNF165P49910 485 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 NFIAQ12857 509 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 SF3B2Q13435 895 aaKnown RBP19.1■□□□□ 0.65
CCDC40-201ENST00000269318 PIBF1Q8WXW3 757 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 LZTS2Q9BRK4 669 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 KIAA1468Q9P260 1216 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 SWAP70Q9UH65 585 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 SERPINB13Q9UIV8 391 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 CEP131Q9UPN4 1083 aa19.1■□□□□ 0.65
CCDC40-201ENST00000269318 NOM1Q5C9Z4 860 aaKnown RBP19.09■□□□□ 0.65
CCDC40-201ENST00000269318 C11orf57Q6ZUT1 292 aaPredicted RBP19.09■□□□□ 0.65
CCDC40-201ENST00000269318 SUPT20HQ8NEM7 779 aa19.09■□□□□ 0.65
CCDC40-201ENST00000269318 ERCC4Q92889 916 aaPredicted RBP19.09■□□□□ 0.65
CCDC40-201ENST00000269318 PCDHAC2Q9Y5I4 1007 aa19.09■□□□□ 0.65
CCDC40-201ENST00000269318 BAZ2BQ9UIF8 2168 aaKnown RBP19.09■□□□□ 0.65
CCDC40-201ENST00000269318 TRIM75PA6NK02 468 aa19.08■□□□□ 0.65
CCDC40-201ENST00000269318 C21orf2O43822 256 aa19.08■□□□□ 0.65
CCDC40-201ENST00000269318 AKR1B1P15121 316 aa19.08■□□□□ 0.65
CCDC40-201ENST00000269318 NLRP5P59047 1200 aa19.08■□□□□ 0.65
CCDC40-201ENST00000269318 GRIN1Q05586 938 aa19.08■□□□□ 0.65
CCDC40-201ENST00000269318 RASGRP2Q7LDG7 609 aa19.08■□□□□ 0.65
CCDC40-201ENST00000269318 ZNF579Q8NAF0 562 aaKnown RBP19.08■□□□□ 0.65
CCDC40-201ENST00000269318 MTMR4Q9NYA4 1195 aa19.08■□□□□ 0.65
CCDC40-201ENST00000269318 SRPRBQ9Y5M8 271 aaKnown RBP19.08■□□□□ 0.65
CCDC40-201ENST00000269318 WNT7AO00755 349 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 ADAMTS3O15072 1205 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 SHMT1P34896 483 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 IQCB1Q15051 598 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 SPZ1Q9BXG8 430 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 EHD4Q9H223 541 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 ANO10Q9NW15 660 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 SERPINA10Q9UK55 444 aa19.08■□□□□ 0.64
CCDC40-201ENST00000269318 KLRF2D3W0D1 207 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 ATP2B1P20020 1258 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 TYW1BQ6NUM6 668 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 ZSCAN30Q86W11 494 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 ZFPM1Q8IX07 1006 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 GPKOWQ92917 476 aaPredicted RBP eCLIP19.07■□□□□ 0.64
CCDC40-201ENST00000269318 IDI2Q9BXS1 227 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 CCDC39Q9UFE4 941 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 KCNH3Q9ULD8 1083 aa19.07■□□□□ 0.64
CCDC40-201ENST00000269318 A0A087WWV3 80 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.06■□□□□ 0.64
CCDC40-201ENST00000269318 YDJCA8MPS7 323 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 PARP1P09874 1014 aaKnown RBP19.06■□□□□ 0.64
CCDC40-201ENST00000269318 GOLGA8HP0CJ92 632 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 CALML3P27482 149 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 GRIPAP1Q4V328 841 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 TTLL6Q8N841 843 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 SLC16A10Q8TF71 515 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 NOL7Q9UMY1 257 aaKnown RBP19.06■□□□□ 0.64
CCDC40-201ENST00000269318 MTMR7Q9Y216 660 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 PPIP5K2O43314 1243 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 HLA-DOAP06340 250 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 KCNA3P22001 575 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 SMARCA1P28370 1054 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 WWC2Q6AWC2 1192 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 SIPA1L1O43166 1804 aa19.06■□□□□ 0.64
CCDC40-201ENST00000269318 MYH8P13535 1937 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 GREB1LQ9C091 1923 aaPredicted RBP19.05■□□□□ 0.64
CCDC40-201ENST00000269318 M0R2N6 131 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
CCDC40-201ENST00000269318 BMP15O95972 392 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 TRAPPC10P48553 1259 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 BLIDQ8IZY5 108 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 FAM177A1Q8N128 213 aaPredicted RBP19.05■□□□□ 0.64
CCDC40-201ENST00000269318 BARHL2Q9NY43 387 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.05■□□□□ 0.64
CCDC40-201ENST00000269318 FAM198AQ9UFP1 575 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 PCDHA4Q9UN74 947 aa19.05■□□□□ 0.64
CCDC40-201ENST00000269318 STXBP3O00186 592 aa19.04■□□□□ 0.64
CCDC40-201ENST00000269318 CACNB3P54284 484 aa19.04■□□□□ 0.64
CCDC40-201ENST00000269318 LONRF3Q496Y0 759 aa19.04■□□□□ 0.64
CCDC40-201ENST00000269318 SPECC1Q5M775 1068 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms