RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 SLC35F6Q8N357 371 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 FGD4Q96M96 766 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 CNNM4Q6P4Q7 775 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 RETREG2Q8NC44 543 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 PIP4K2CQ8TBX8 421 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 USP6NLQ92738 828 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 FERMT2Q96AC1 680 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 BICD1Q96G01 975 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 EPN1Q9Y6I3 576 aaPredicted RBP11.82□□□□□ -0.52
CPT1A-201ENST00000265641 USP5P45974 858 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 ADKP55263 362 aaKnown RBP11.81□□□□□ -0.52
CPT1A-201ENST00000265641 SLC4A8Q2Y0W8 1093 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 GSTA5Q7RTV2 222 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 DRC3Q9H069 523 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 VPS16Q9H269 839 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 DNM2P50570 870 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 IL9RQ01113 521 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 TMED1Q13445 227 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 IDI1Q13907 227 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 ASIC2Q16515 512 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 LGSNQ5TDP6 509 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 SPATA1Q5VX52 437 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 C3orf20Q8ND61 904 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
CPT1A-201ENST00000265641 JAK2O60674 1132 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 FGFR1OP2Q9NVK5 253 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 REREQ9P2R6 1566 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 GMNNO75496 209 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 TADA3O75528 432 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
CPT1A-201ENST00000265641 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 MKNK2Q9HBH9 465 aa11.81□□□□□ -0.52
CPT1A-201ENST00000265641 TYW1Q9NV66 732 aaKnown RBP11.81□□□□□ -0.52
CPT1A-201ENST00000265641 TRIM66O15016 1216 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 RNF113AO15541 343 aaKnown RBP11.8□□□□□ -0.52
CPT1A-201ENST00000265641 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
CPT1A-201ENST00000265641 SLC5A1P13866 664 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
CPT1A-201ENST00000265641 EIF4A2Q14240 407 aaKnown RBP11.8□□□□□ -0.52
CPT1A-201ENST00000265641 BBOF1Q8ND07 529 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ATP6V0A2Q9Y487 856 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 PPIP5K1Q6PFW1 1433 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 RAPGEF3O95398 923 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
CPT1A-201ENST00000265641 CUL1Q13616 776 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPT1A-201ENST00000265641 G2E3Q7L622 706 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ERMNQ8TAM6 284 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ARHGAP10A1A4S6 786 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 TTC36A6NLP5 189 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 HVCN1Q96D96 273 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 RIMS2Q9UQ26 1411 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 PSMD2Q13200 908 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 TNIP1Q15025 636 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 PPP2R5BQ15173 497 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ANKRD20A4Q4UJ75 823 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ANKRD20A8PQ5CZ79 823 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ANKRD20A2Q5SQ80 823 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ANKRD20A1Q5TYW2 823 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 KLHL7Q8IXQ5 586 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 HNRNPLLQ8WVV9 542 aaKnown RBP11.8□□□□□ -0.52
CPT1A-201ENST00000265641 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
CPT1A-201ENST00000265641 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 HNRNPH1P31943 449 aaKnown RBP11.79□□□□□ -0.52
CPT1A-201ENST00000265641 ARHGEF25Q86VW2 580 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 GSDMBQ8TAX9 411 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.52
CPT1A-201ENST00000265641 ZNF76P36508 570 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 DESI2Q9BSY9 194 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 ANO9A1A5B4 782 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 CHL1O00533 1208 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 DTNBO60941 627 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 ARHGEF18Q6ZSZ5 1173 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 ESR2Q92731 530 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 FAM227BQ96M60 508 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 TMEM232C9JQI7 657 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 POLR2DO15514 142 aaKnown RBP11.79□□□□□ -0.52
CPT1A-201ENST00000265641 SESN3P58005 492 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 WDR78Q5VTH9 848 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 USP28Q96RU2 1077 aa11.79□□□□□ -0.52
CPT1A-201ENST00000265641 NCOA5Q9HCD5 579 aaKnown RBP11.79□□□□□ -0.52
CPT1A-201ENST00000265641 A0A1W2PP64 1363 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 H7C1D1 291 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 UQCRFS1P1P0C7P4 283 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
CPT1A-201ENST00000265641 LDHAL6AQ6ZMR3 332 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 GMNCA6NCL1 334 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
CPT1A-201ENST00000265641 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
CPT1A-201ENST00000265641 GRK7Q8WTQ7 553 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 SERPINA10Q9UK55 444 aa11.78□□□□□ -0.52
CPT1A-201ENST00000265641 MYOM2P54296 1465 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms