RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 KIAA1683Q9H0B3 1180 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 ZFYVE28Q9HCC9 887 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 FBXO28Q9NVF7 368 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 MTMR4Q9NYA4 1195 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 ORC4O43929 436 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 FAM83BQ5T0W9 1011 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L2Q6R6M4 530 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 REM2Q8IYK8 340 aaPredicted RBP8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 NEDD1Q8NHV4 660 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 CD99L2Q8TCZ2 262 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 MAP4K1Q92918 833 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 CTNNA3Q9UI47 895 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 PLIN4Q96Q06 1357 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 RLFQ13129 1914 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 IGKV6D-41A0A0C4DH26 115 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 C19orf81C9J6K1 198 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 TLR2O60603 784 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 TTLL1O95922 423 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 NDUFB10O96000 172 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 P2RX7Q99572 595 aaKnown RBP8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 VCPKMTQ9H867 229 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 TXNRD2Q9NNW7 524 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 GINM1Q9NU53 330 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 TMX2Q9Y320 296 aa8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 U3KPZ7 1027 aaPredicted RBP8.56□□□□□ -1.04
DEPDC1B-201ENST00000265036 E7EWF7 191 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 FLOT1O75955 427 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP14P54578 494 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 CYB5R4Q7L1T6 521 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 ESR2Q92731 530 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 LRRC2Q9BYS8 371 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 RNF41Q9H4P4 317 aaPredicted RBP8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 MGAMO43451 1857 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 SMCHD1A6NHR9 2005 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 F5H6K3 240 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 SLC27A2O14975 620 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 CTGFP29279 349 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 HERVK_113P62684 666 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 KLRC3Q07444 240 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 CREB3L3Q68CJ9 461 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 POTEEQ6S8J3 1075 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 KCTD1Q719H9 257 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 RALYLQ86SE5 291 aaKnown RBP8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 SH2D4AQ9H788 454 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 TNKSO95271 1327 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 ADGRA2Q96PE1 1338 aa8.55□□□□□ -1.04
DEPDC1B-201ENST00000265036 FKTNO75072 461 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 FGRP09769 529 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 CPA1P15085 419 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 MCCP23508 829 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 SP3Q02447 781 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 RASEFQ8IZ41 740 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 ATG4CQ96DT6 458 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 C12orf42Q96LP6 360 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 GOPCQ9HD26 462 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 NYAP2Q9P242 653 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 DNAH12Q6ZR08 3092 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 SPDYE16A6NNV3 312 aaPredicted RBP8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 TAL1P17542 331 aaPredicted RBP8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 SLC4A3P48751 1232 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 TRDNQ13061 729 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 IKQ13123 557 aaPredicted RBP8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 CCDC96Q2M329 555 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 RCSD1Q6JBY9 416 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 RAB11FIP4Q86YS3 637 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 ENAHQ8N8S7 591 aaPredicted RBP8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 TMEM47Q9BQJ4 181 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 UBAC1Q9BSL1 405 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 CPVLQ9H3G5 476 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 TAOK2Q9UL54 1235 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 TRIM17Q9Y577 477 aa8.54□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 GOLGA8HP0CJ92 632 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 BCRP11274 1271 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 OSBPP22059 807 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 SNAP25P60880 206 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 LACTBP83111 547 aaPredicted RBP8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 PABPC4Q13310 644 aaKnown RBP eCLIP8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 PLS1Q14651 629 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 NECTIN1Q15223 517 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 ADCK5Q3MIX3 580 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 SLFN13Q68D06 897 aa8.53□□□□□ -1.04
DEPDC1B-201ENST00000265036 C17orf99Q6UX52 265 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 517 ms